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berkeley_reactor_200306_biofilm_scaffold_132711_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19333..20232

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPQ4_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 287.0
  • Bit_score: 175
  • Evalue 6.60e-41
Putative High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDX36349.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 295.0
  • Bit_score: 504
  • Evalue 6.70e-140
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 287.0
  • Bit_score: 175
  • Evalue 1.90e-41

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGCTGCAATTCCTGCTGAGTGGCATCGCCATCGGCGCCGTCTATGGCCTCATCGGCATGGCGCTGGCCATCTCCTTCTACGTCACGCGCATCATCAACTTCGCCCAGGGGCAATTGATGATGGTGACCGTCATGGTCACGGCGGAGGCAGCGTCGTCCGGCTATCCCGTCTGGGTCGCCGCGATCGCCGGTCTTGCCTGCTCGTGCCTCGTCGGCGTGCTCTCCTATCTCATCGCGGTCCGGCCGATCCTGCTCACCAACCGGTTCAGCTTCGGCTGGCTGGTCTCGACGCTCGGCTTCGCCGTGATCGTCGAGAATGCTGCCGCCTATATCTGGGGGCCGACCTCGCAGCCGTTTCCGCCCTTCCTTAGGGATGTCAGCCTGCCGATCGGGGATGCGGTGCTGACGGGCCAGCAACTCCTCACGATCGTCGTGGCGGCGGTGCTGACGATCGGTTTCGAGCTGGTACGCCGGCACACCATCTTCGGCAAGCTCTCCATGGCGACGGCCTTCGATCCGGAAATGGCCTCGGCCATCGGCGCGGACACGACGGCGGTCTCGATCGGCGCCTTCGCGGTCTCGGCCCTCTTCGCCGGCATCGCGGGGCTTCTCATCGGGCCGACGACCTTCGCCAATCCCTATCTCGGCGACACGTTCGGAACCTACGGCTTCATCGCCATGATGATCGGCGGAGGAACGGAGCGTCCGATCGCGGCGATGGCCGGCGGACTGGTCCTCGGCATCTGCGCCGAGGGTGCCAACGCCATGATCAATTCGCAGGCCTCCGACTGGTTTCCGTTCATCGTCCTCGTCCTGATCCTGATCGTCTCGCCGAAGGGATTGCTCAGCAGCAGCAATCCGCTCCTGCGGCCGCGGCGCGGTGCGGGGAAGCCGGCATGA
PROTEIN sequence
Length: 300
VLQFLLSGIAIGAVYGLIGMALAISFYVTRIINFAQGQLMMVTVMVTAEAASSGYPVWVAAIAGLACSCLVGVLSYLIAVRPILLTNRFSFGWLVSTLGFAVIVENAAAYIWGPTSQPFPPFLRDVSLPIGDAVLTGQQLLTIVVAAVLTIGFELVRRHTIFGKLSMATAFDPEMASAIGADTTAVSIGAFAVSALFAGIAGLLIGPTTFANPYLGDTFGTYGFIAMMIGGGTERPIAAMAGGLVLGICAEGANAMINSQASDWFPFIVLVLILIVSPKGLLSSSNPLLRPRRGAGKPA*