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berkeley_reactor_200306_biofilm_scaffold_135355_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(28541..28999)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000372828E similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 146.0
  • Bit_score: 159
  • Evalue 1.50e-36
Uncharacterized protein {ECO:0000313|EMBL:KCZ56756.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 149.0
  • Bit_score: 158
  • Evalue 5.90e-36
Rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 139.0
  • Bit_score: 153
  • Evalue 3.00e-35

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Taxonomy

Hyphomonas chukchiensis → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATTTCCCAGAAAGCCCGCTATGCCTTCAAGGCGCTGTTCGCCCTGGTCCGCGCCGGCGACCGCGTGGTGCAGGCCCGCGAGATCGCGAGCACCGAGCAGATCCCGCAGAGCTTCCTGGAGCAGATCCTGCTCGATCTGCGGCGCGGCGGCCTCGTCGGCAGCCGCCGCGGCAAGGTCGGCGGCCACTACCTGGTGAAGGACCCGGCCGAGATCAGCTGCGGCCAGGTGCTGCGCCTGATCGACGGGCCGATCGCCCCGCTCCCCTGCCTCTCCAAGACCGCCTACCGCCGCTGCGACGACTGCCGCGACGAGCGGGCCTGCGCCGTCCGCCACCTCTTCGCCGACGGCTATGCCGCCATGATCGGCGCGCTCGAGAACGCCTCCCTGCTGGAAGCCTCGCGCCGGGCCGACGGCACGGCCGCAGCCGAGACCATCATCGCCGGCGCCTATATCTGA
PROTEIN sequence
Length: 153
MISQKARYAFKALFALVRAGDRVVQAREIASTEQIPQSFLEQILLDLRRGGLVGSRRGKVGGHYLVKDPAEISCGQVLRLIDGPIAPLPCLSKTAYRRCDDCRDERACAVRHLFADGYAAMIGALENASLLEASRRADGTAAAETIIAGAYI*