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berkeley_reactor_200306_biofilm_scaffold_135355_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 29290..29808

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000360303A similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 177.0
  • Bit_score: 233
  • Evalue 1.50e-58
peptidoglycan-associated lipoprotein similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 170.0
  • Bit_score: 232
  • Evalue 5.70e-59
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ADU42916.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 170.0
  • Bit_score: 232
  • Evalue 2.80e-58

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCTCAATTCCCTGCGTATCGTGCGCGGCCTGCGCTTTGTGGCCGTGCTGTCCACCGTCCTGGCGCTGGGCGCCTGCGCCAAGAACACCGCGGCCAATGGCGGCCTCGACGGCGCCGGCGGACTGGGCGCGGGCGGGGTGGCGCGGCCGGGCAGCCAGCAGGACTTCGTCGTCAACGTCGGCGACCGCGTCTTCTTCCTGGAGGACCAGTCGGACCTCACCGGCCAGGCCCAGTCGACGCTCTCCAAGCAGGCGCAGTGGCTGCGGCAATATCCGCGCTACACCATCACCGTCGAGGGCCATGCCGACGAGCGCGGCACCCGCGAGTACAACATCGCCCTCGGCGCCCGTCGCGCCCAGGCGGTGCGCGACTATCTGATGGCGCAGGGCATCCCGGCCGGGCGCATGCGCACCATCTCCTACGGCAAGGAGCGCCCGGTGGCGACCTGCAACGACGAATCCTGCTGGACGCAGAACCGCCGCGCCGTCACCGTGCTGAACGGCGCCGCCGCCTCCTGA
PROTEIN sequence
Length: 173
MLNSLRIVRGLRFVAVLSTVLALGACAKNTAANGGLDGAGGLGAGGVARPGSQQDFVVNVGDRVFFLEDQSDLTGQAQSTLSKQAQWLRQYPRYTITVEGHADERGTREYNIALGARRAQAVRDYLMAQGIPAGRMRTISYGKERPVATCNDESCWTQNRRAVTVLNGAAAS*