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berkeley_reactor_200306_biofilm_scaffold_125732_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1..930)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 298.0
  • Bit_score: 310
  • Evalue 2.50e-81
dctB; C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 312.0
  • Bit_score: 292
  • Evalue 1.10e-76
Putative C4-dicarboxylate transport sensor protein DctB n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVE0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 312.0
  • Bit_score: 302
  • Evalue 3.70e-79

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Taxonomy

Acidocella aminolytica → Acidocella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGATCCGAAGCCCGATCCTGGACCGTCTTTCCCGGCGCCGCGGGGAATGGCTGGCCTTCGCCGCCGTCGCCGCGACCGTGCTCGGCCTCACCGCCTGGCTGGCCGGCGAGGTCGGCCGCAGCCGGGCCGCCGAGGCGCTGCGGGCCCAGGCCGCCGGCAGCGCCACGCTCAACGTCGCGGTGCTGCGCGCCGAGCTGGAGAAGCAGCGCGCCCTGCCCTACGTGCTGTCGCAGGATCCCGACGTGCAGGCCGCCCTCGCCGGCCACGAGCCGGTGCGCATCGCCGCCCTCAACGCCAAGCTGGAGACGCTGGTGCGCGGCACCCGCACGGCGGTGATCTACCTCATCGACGCGTCGGGCACCGCCATCGTCTCCAGCAACTGGCGCGAGCCGACCAGCTTCGTCGGCAGCAATTATCGCTTCCGCCCCTATTTCACCGGCGCCGTCACCGACGGGGCGGCCGAGCATTTCGCCCTCGGCACGGTGAGCAAGCGGCCCGGCCTCTACATCTCCCGGCGCATCGGCGAACCCAACGCCCTGCTCGGCGTGGTCGTGGTCAAGGTCGAGTTCGACCAGGTCGAAGCGGACTGGGGCCAGTCCGGCGCCGCGGTCTATGTCGCCGATCCGCGCGGTATCGTGCTCCTGACCAGCGAGCCCGACTGGCGCTTCCTGGCCGAGGCGCCGATCGCGCCCGGCGATGCCGGAGCGATCCGCGCCAGCCTGCAGTTCGGCAATGCGCCGCTGACGCCGCTGCCGCTGCGCCCGCGCGACGCCGGCACGGCCGGCGCCGACTTCGCTGCCCTCCCCGACGGCTCGCTGCAGCTCGCCAGCGAAAGCGCGGTGCCTTCGACGCCCTGGCGCCTGCATCTGCTCCTGCCTGCCGACGATGCGCTCGCGGCCGGCGCGCGCACCGCCCGCATCGCCGCGCTC
PROTEIN sequence
Length: 310
MIRSPILDRLSRRRGEWLAFAAVAATVLGLTAWLAGEVGRSRAAEALRAQAAGSATLNVAVLRAELEKQRALPYVLSQDPDVQAALAGHEPVRIAALNAKLETLVRGTRTAVIYLIDASGTAIVSSNWREPTSFVGSNYRFRPYFTGAVTDGAAEHFALGTVSKRPGLYISRRIGEPNALLGVVVVKVEFDQVEADWGQSGAAVYVADPRGIVLLTSEPDWRFLAEAPIAPGDAGAIRASLQFGNAPLTPLPLRPRDAGTAGADFAALPDGSLQLASESAVPSTPWRLHLLLPADDALAAGARTARIAAL