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berkeley_reactor_200306_biofilm_scaffold_125732_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1168..2496

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=DCTA_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 446.0
  • Bit_score: 665
  • Evalue 2.40e-188
C4-dicarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 446.0
  • Bit_score: 665
  • Evalue 6.70e-189
C4-dicarboxylate transport protein {ECO:0000255|HAMAP-Rule:MF_01300}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 446.0
  • Bit_score: 665
  • Evalue 3.30e-188

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Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGCCCCCATCGCGATCACCCCACCGGCCGCTTCGCGCAAGCGACCATTCTATGCCAGCCTCTATGTCCAGGTGCTGGTCGCCATCGCCGCCGGCATCGCGCTCGGCCATTACTATCCCGATCTCGGCACCAGCCTGAAGCCGCTGGGCGATGCCTTCATCAAGCTGATCAAGATGGTGATCGCGCCGGTGATCTTCCTCACCGTCGTCACCGGCATCGCCGGGGTGAGCGACCTGAAGAAGGTCGGACGCGTCTTCCTCAAGGCGATGGCCTATTTCTTGGTGTTCTCGACCCTGGCGCTGATCGTCGGCCTGATCGTCGGCAACGTGGTCCAGCCCGGCGCGGGCCTCAACGTCGATCCCGCCGCGCTCGATCCGAAGGCGGTGGCCGAGTTCACCGAGAAGGCGCACGACCAGACCGTGGTCGGCTTCCTCGTGAACATCATCCCGGCGACGCCGGTCAGCGCCTTCGCCGGCGGCGACGTGCTGCAGGTCTTGTTCTTCTCCGTGCTGTTCGGCATCGCCCTGGCGCTGGTCGGCGAGCGGGCGGCGCCGGTCATGGCGGTGCTGCAGTCGCTGTCGCAGGCGATGTTCCGCCTGGTCGCCATCCTGATGCGGGCCGCGCCGGTCGGCGCCTTCGGCGCCATGGCCTTCACCATCGGCAAGTTCGGCATCGGCGCCGTGGCCAAGCTGCTGTTCCTGATCCTGACCTTCTACGCCACCTCGGTGCTGTTCGTGGTGCTGGTGCTGGGGGCGGTGTGCCTCTTCAACGGCTTCTCGATCTTCGCGCTGATCCGCTACATCAAGGAGGAGCTGCTCCTCGTGCTCGGCACCAGCTCGTCCGAGGCGGCGCTGCCGAGCTTGATGGAGAAGATGGAGCGGGCCGGCTGCAAGGGCTCGGTGGTCGGCCTGGTCATCCCCACCGGCTATTCCTTCAACCTCGACGGCACCAACATCTACATGACGCTGGCGGCGCTGTTCATCGCCCAGGCGACCGGCATCCATCTCTCGGCCGGCGAGCAGATCCTGCTCCTCCTTGTGGCGATGCTCAGCTCCAAGGGCGCGGCCGGCATCACCGGCGCCGGCTTCATCACCCTGGCGGCGACGCTGTCCGTGGTGCCGTCGGTGCCGGTTGCCGGCATGGCGCTGATCCTGGGCATCGACCGCTTCATGTCGGAATGCCGGGCGCTCACCAACCTGGTCGGCAATGCGGTGGCGACCATCGTGGTGGCGCGCTGGGAAGGCGAGCTCGACCGCGAGCGGCTGGCCGCGGCCCTGAGCGGCGAGGCCGAGGCCGCACCGGTGCCGGCGCTCGCCCCGGCGGAGTGA
PROTEIN sequence
Length: 443
MAPIAITPPAASRKRPFYASLYVQVLVAIAAGIALGHYYPDLGTSLKPLGDAFIKLIKMVIAPVIFLTVVTGIAGVSDLKKVGRVFLKAMAYFLVFSTLALIVGLIVGNVVQPGAGLNVDPAALDPKAVAEFTEKAHDQTVVGFLVNIIPATPVSAFAGGDVLQVLFFSVLFGIALALVGERAAPVMAVLQSLSQAMFRLVAILMRAAPVGAFGAMAFTIGKFGIGAVAKLLFLILTFYATSVLFVVLVLGAVCLFNGFSIFALIRYIKEELLLVLGTSSSEAALPSLMEKMERAGCKGSVVGLVIPTGYSFNLDGTNIYMTLAALFIAQATGIHLSAGEQILLLLVAMLSSKGAAGITGAGFITLAATLSVVPSVPVAGMALILGIDRFMSECRALTNLVGNAVATIVVARWEGELDRERLAAALSGEAEAAPVPALAPAE*