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berkeley_reactor_200306_biofilm_scaffold_140837_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(14000..15526)

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA 2 {ECO:0000313|EMBL:CDX14980.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CDX14980.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 503.0
  • Bit_score: 563
  • Evalue 2.70e-157
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z7F7_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 501.0
  • Bit_score: 541
  • Evalue 7.80e-151
sugar ABC transporter ATPase subunit similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 500.0
  • Bit_score: 482
  • Evalue 9.30e-134

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGCGCTTGAGCGCCGCACCGCCCCTTCGCCTGCTGGCGTCTTCCGTGACGAAGGCCTATGGCGCCACCGTCGCGCTGGCCGAGGTGACGCTCGAGCTCGAGGCGGGCAAGGTCCATGCGCTGCTCGGTGAGAACGGGGCCGGCAAGTCGACCCTGGTGAAGATCCTGAGCGGCGTCGTGCAGCCCAACAGCGGCGCCATGCGGCTCGACGGGGGCGCCTATCGGCCGCATTCGATCCTCGCCGCGCGCCGGGCCGGCGTCGCCACCGCCTTCCAGGAGCTGAGCCTGCCGCCCAACCTCTCGGTGGCCGAGGCGCTGGCCCTGCCGGCGCTGCGCAAGGGCGTGCTCGGCCTGGTCTCCTCCCGGCGCACGGCCGAAGCGGCCGCCGCGATTCTTGCCCGCTACCGCCTGACCGATGTCTCGCCGCTGGCCCCGATCGCCGGCCTGTCGCTCGCCCAGCGCCAGCGCATCGAGATCGCCCGCGCCATGCACCATGCCGGATCGGTCCTCGTTCTCGACGAGCCGACCGCCGCCCTCACCGATGTCGACTGGCTGTTCGAGCTGGTGCGCGAGAAGACCGCCGCCGGCACCGCGGTGCTCTACATCTCCCATCGCCTTGCCGAAGTGCGCCAGCTCTGCTCGGCCGCGACGGTGCTGCGCAACGGCCGCTCCGTCGCCCGCGTCGAGCTGTCGGACGCCACCGATTCCGACATTTTCCGCCTGATGGTCGGCCGCAGCGAGCTCGCCGCGGCGCGGCCCGCCGCCGCACGGTCCGGCCGCGACGTGCCGGTCCTGCGGCTCAGGGACGTCAGCGGCGGCAAGCTGCGGGGCGTGAGCCTCGACCTCCACCGCGGCGAGATCCTGGGTGTCGCCGGCCTGGAGGGACAGGGGCAGCGCGAGCTGTTCCGCACCCTCGTCGGCCTGGAGCCGCTCGGCGCCGGCGAGATCCGGGTGCAGGACCGGCCGATCCGGCCGTCGGGCCCGCGCGCGGCGCTCGCCGCCGGGCTCAGCTTCCTGCCGGAGGAGCGCAAGGTCGAGGGCATCTTCCCGGCCCTGACGGCGGCGAGCAACGTCGTGCTGCCGGTGCTGCAGCGGATCAGCCGGGCCGGCGCGATCTGGCCGGCGCTGGAGCGCCGCGGCGCCGGCGCCGTTGCGGGCGCGGTCGAGCTCAGCGCGCGCTATCTCGATTTCCGCATCGGCGAACTCTCCGGCGGCAATCAGCAGAAGGCGCTGCTCGCCCGCGCCATGATGACCGGCGCCGGCACGCTGCTGCTCTACGACCCGACGCGCGGCGTCGATGTCGGCACCAAGCAGGCGATCTATGCGGCGATCCAGGCCTTCGCCGCCAAGGGCGGCTCGGTGCTGCTCTATTCCTCCGAGCTGCCGGAGCTGGTGCGGCTCGCCGACCGCTGCCTGGCGATCTATGGCGGGCGGGTCTTCGCCGAATTCGAGGGCAGCGCCATCGAGGAGCGGGCCCTGGTGGCGGCGCTGACCGGCCATGCCGATGCCGGGAGGACCGCGGCGTGA
PROTEIN sequence
Length: 509
MRLSAAPPLRLLASSVTKAYGATVALAEVTLELEAGKVHALLGENGAGKSTLVKILSGVVQPNSGAMRLDGGAYRPHSILAARRAGVATAFQELSLPPNLSVAEALALPALRKGVLGLVSSRRTAEAAAAILARYRLTDVSPLAPIAGLSLAQRQRIEIARAMHHAGSVLVLDEPTAALTDVDWLFELVREKTAAGTAVLYISHRLAEVRQLCSAATVLRNGRSVARVELSDATDSDIFRLMVGRSELAAARPAAARSGRDVPVLRLRDVSGGKLRGVSLDLHRGEILGVAGLEGQGQRELFRTLVGLEPLGAGEIRVQDRPIRPSGPRAALAAGLSFLPEERKVEGIFPALTAASNVVLPVLQRISRAGAIWPALERRGAGAVAGAVELSARYLDFRIGELSGGNQQKALLARAMMTGAGTLLLYDPTRGVDVGTKQAIYAAIQAFAAKGGSVLLYSSELPELVRLADRCLAIYGGRVFAEFEGSAIEERALVAALTGHADAGRTAA*