ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_140837_35

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(37576..38685)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003663979 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 367.0
  • Bit_score: 329
  • Evalue 3.40e-87
Putative Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDX32479.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 369.0
  • Bit_score: 586
  • Evalue 1.60e-164
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 369.0
  • Bit_score: 217
  • Evalue 4.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGAAACATCTTGTCGCGGCGCTGCTGGGTGCCGCCGTCCTCGCCGGGCCGGCGTCGGCCGACGAGATCACCGTCGGCATGACGGCGCCGCTCTCCGGCCCGCAGGCCTTCTTCGGCACGACCTGGCACAACGGCTTCAAGCTCTATGTCGATGCCCTCAACGCCGCCGGCGGCGTCAACGGCACCACCATCAAGTACCAGCAGGAGGACGACAAGGCCGACCCGCGCGAGGGCACGCTGGTCGCCCAGAAGCTGTGCGACAACGACGCCGTCGTCATCGGCCTGGTCAACTTCAACAGCGGCGTGGCCCAGTCGACCCTGCCGATCTACGAGGAGTGCGGCATGCCCAACATGACGTTCGCCTCCAATCCGAGCCTGACCAGGCAGGGCTACAAGTTCATGGTGCGCCCGGTCGCCAACGACACCGCCGGCGCCAAGCTCCCGGCCGACTACGCCCTGAAGACCCTCGGCGCCAGGACCGCGGCCATCGTCAACGACAAGCAGGTGTTCGGCCAGGGCATCTCCGAGATCTTCGCCAAGAATTTCTCCGATGGCGGCGGCAAGGTCCTGTCGACCTCGTCCGTCAATCCGACCGATGTCGACTTCACCGCGCTCTTGACCCAGATCAAGACCCAGAAGCCGGACGTGATCTATCTCGGCGCCGTCATGCCGCAGCTCGCTCTGTTCGCCCGGCAGATGAAGGACCAGGGCGTCACCGCCCATCTGCTGGTGCCGGACGGCGGCTATACGCCAGAATTCATCGAGCAGGCCGGCGAAGCCAACGTGCAGGGCGTGGTCACCGCCATCCAGGTGCCGCCGATGGACGCCAGCCCCGCCATCGCCGACTTCGCCAGGAAGTATAAGGAAAAGTACGGCCAGGACGCCGGGCCCTACTCGATCTACGGCTATGTCCAGGGCCAGGTGCTCGAGCAGGTGCTCAAGGACACCAAGGACCGCACCCGCGAGGGCCTCGACAAGGCGCTGCACGCGGTCAAGGCCAAGACTGCGGTCGGCGAGCTGGAGTTCGACGAGACCGGCGAGCTGAAGGTGGCGCCGTCCTTCCTCTATGAGGTCAAGGGCAAGGAGTTCAAGCTGGTCGGCCAGATGTAG
PROTEIN sequence
Length: 370
MKHLVAALLGAAVLAGPASADEITVGMTAPLSGPQAFFGTTWHNGFKLYVDALNAAGGVNGTTIKYQQEDDKADPREGTLVAQKLCDNDAVVIGLVNFNSGVAQSTLPIYEECGMPNMTFASNPSLTRQGYKFMVRPVANDTAGAKLPADYALKTLGARTAAIVNDKQVFGQGISEIFAKNFSDGGGKVLSTSSVNPTDVDFTALLTQIKTQKPDVIYLGAVMPQLALFARQMKDQGVTAHLLVPDGGYTPEFIEQAGEANVQGVVTAIQVPPMDASPAIADFARKYKEKYGQDAGPYSIYGYVQGQVLEQVLKDTKDRTREGLDKALHAVKAKTAVGELEFDETGELKVAPSFLYEVKGKEFKLVGQM*