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berkeley_reactor_200306_biofilm_scaffold_140837_55

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 57243..57848

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein RecR n=1 Tax=Nitratireductor indicus C115 RepID=K2NYG7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 201.0
  • Bit_score: 317
  • Evalue 7.20e-84
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 201.0
  • Bit_score: 317
  • Evalue 1.00e-83
recombination protein RecR similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 201.0
  • Bit_score: 310
  • Evalue 1.90e-82

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGCCCTCCTCCGTCGCCGGCCCCGAGATCGAGCGCCTGATCCAGCTCCTCGCCCGCCTGCCCGGCCTCGGCCCGCGCTCGGCCCGCCGCGCGGCGCTGACGCTGATCAAGAAGCGCGAGCAGCTGATGAGCCCGCTGGCCGAGGCCATCCGCATCGCCTGCGAGCGCGTCACGGTCTGCGGCACCTGCGGCAATGTCGACACCTCCGACCCCTGCACGCTCTGCCGCGATCCGCGCCGCGAGACCTCGCTCCTGATCGTGGTCGAGGACGTCGCCGATCTCTGGGCGCTGGAGCGGGCCAATGTCGCCAATGCCCGCTATCACGTGCTCGGCGGCACGCTCTCGCCGCTCGACGGCGTCGGCCCCGACGACCTCAACCTGGAGCGCCTGGTCGCCCGCGTCGCCGAGGGCGGCATCGCCGAGGTGGTGCTGGCGCTCAACGCCACGGTCGACGGCCAGACCACGGCGCATTACGTCACCGACCTCCTGGCCGCCACCGGCGTCAAGGTGACGAAGCTGGCGCACGGCGTGCCGGTCGGAGGCGAGCTCGACTATCTCGACGAGGGTACCCTGGCGGCGGCTGTCCGCAGCCGCACCCCGTTCTGA
PROTEIN sequence
Length: 202
MPSSVAGPEIERLIQLLARLPGLGPRSARRAALTLIKKREQLMSPLAEAIRIACERVTVCGTCGNVDTSDPCTLCRDPRRETSLLIVVEDVADLWALERANVANARYHVLGGTLSPLDGVGPDDLNLERLVARVAEGGIAEVVLALNATVDGQTTAHYVTDLLAATGVKVTKLAHGVPVGGELDYLDEGTLAAAVRSRTPF*