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berkeley_reactor_200306_biofilm_scaffold_150415_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20310..21335

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C832F similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 341.0
  • Bit_score: 374
  • Evalue 1.10e-100
HTH-type transcriptional regulator AglR {ECO:0000313|EMBL:EHK59271.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 334.0
  • Bit_score: 336
  • Evalue 2.70e-89
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 339.0
  • Bit_score: 329
  • Evalue 6.70e-88

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
GTGAATCTGAAGGAGCTTGCCGAGCATCTCGGCCTGTCGCAGACCACGGTCAGCCGGGCGCTGAACGGCTTTCCCGAAGTCGGCGAGAAGACGCGCCGGCGCGTGGCGGAAGCGGCCAGAGAGTTCCACTACCGGCCGAACGCCAGCGCGCGCAAGCTCGCCACCGGTCGGGCCGGTGCGCTCGGCATCGTCTTCTCCACCGGGCGCAACCTGCTGCTCGACCCGATCTTCACCGACTTCCTCGCCGGCGTCGCCGACGGCAGCGCCGGCAGCGACACCGACGTGCTGGTGTCCTCGCCGCGCGGCGACGAGGCGGAAACCTATCGGCGCATGGCGCGGGCGCACTCGGTCGACGCGGTCATCCTGTCTTCGCCGCTGGTGGAGGATGCGCGCGTGCCGCTGCTGCAGCGCCTGCGCCTGCCCTGCGTGGTGCACGGCCGCACGCGCAGCACCGCGCCCTGCGCCTTTCTCGACATCGACAACGAGGAAGCCTTCCGCAATGCCACCGGCATGCTGGCCGATCTCGGTCACCGCCGAATCGGCCTGATCAACGGCGATCCGGGCTTCACCTTCGCCCTGCACCGCGAGCGCGGCTGGCGCGAGGCGCTCGCGGCGCGCGGGCTGCCGGCACCCCCCGCCCTCGCCCGCAGCGCACCGATGACCGAGGAGAACGGCTATCGCCTGGCCCGCACCCTGTTCGAGGCGGCGGAGCCGCCGACCGCCCTGATCTGCTCCTCGATCTTCGCCGCCCTCGGCGCCATGCGCGCCGCCCGCGACAGTGGTCGCGCCATCGGCCGCGACCTCTCGCTCGTCGCCCATGACGACGGCCTGGCGGCCATCCGGCCGGAGACGCTGACCCCGGCTCTCACCACCACCTTCTCCTCGATCCGCGCCGCCGGCGCGCGCATCGCCGAGATCGCCCTGGCGCTGGCGGAGGGCGCCGATCCCGCCGCCCTGCGGGAAGTCTGGCCGGTGGATCTGGTGTTCCGCGGCTCCACCATGCCGCCGCCGCGGGATGCGGCCTGA
PROTEIN sequence
Length: 342
VNLKELAEHLGLSQTTVSRALNGFPEVGEKTRRRVAEAAREFHYRPNASARKLATGRAGALGIVFSTGRNLLLDPIFTDFLAGVADGSAGSDTDVLVSSPRGDEAETYRRMARAHSVDAVILSSPLVEDARVPLLQRLRLPCVVHGRTRSTAPCAFLDIDNEEAFRNATGMLADLGHRRIGLINGDPGFTFALHRERGWREALAARGLPAPPALARSAPMTEENGYRLARTLFEAAEPPTALICSSIFAALGAMRAARDSGRAIGRDLSLVAHDDGLAAIRPETLTPALTTTFSSIRAAGARIAEIALALAEGADPAALREVWPVDLVFRGSTMPPPRDAA*