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berkeley_reactor_200306_biofilm_scaffold_150415_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21480..22214)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Thauera sp. 28 RepID=N6YGX7_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 244.0
  • Bit_score: 385
  • Evalue 3.40e-104
reverse transcriptase family protein similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 244.0
  • Bit_score: 377
  • Evalue 2.60e-102
Reverse transcriptase family protein {ECO:0000313|EMBL:AIO36809.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 244.0
  • Bit_score: 377
  • Evalue 1.30e-101

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Taxonomy

Burkholderia cenocepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
GTTCGCCGTTATCTAGGGGCCGGCATTCTGGATGGGGGCGTGCGGATCGAGCGCCATGAGGGCACGCCGCAAGGCGGCCCCCTGTCGCCGCTGCTGGCCAATGTCCTGCTGGACGACGTCGACCGCGCCTTGGAGCGGAATGGGCATCGTTTTGCCCGCTACGCCGACGACTGCAATGTCTATGTCCGCAGCCGCAAGGCGGGCGAACGCGTGCTGGCAGCCCTGCGCCGGCTCTACGCGCGTCTGCATCTGGTGGTGAACGAGACCAAGACGGCGGTCGCTCCGGCCTTCGGACGCAAGTTCCTCGGCTTCGAGCTGTGGAAGGCGCCCGGGGGAGCGGTCAAGCGCAAGGTGGCCAAGAAGGCACTGGCGACCTATCGCCAGCGCATCCGGCAACTGACGCGGCGCAGCGGCGGGCAAAGCCTCGCCCAGGTCAGCGAGAAGCTGAGGCGGTACGTGCCGGGCTGGAAGGGGTACTTCCGGCTGGCGCAAACGCCCAGCGTCTTCGCCAAGCTGGACGAATGGCTGCGTCACAGGCTGCGAGCCCTGCAACTCAAGCAATGGAAGCGGGGCTCGACCATGTACCGGCAAATGCGCGCACTCGGGGCGAGCGAAACGGATGCAAGGACGGTCGCGGCAAACTCACGATGCTGGTGGCACAACAGCCGCCTGCTCCTGAACCGCGTCCTCCCCATCGCCTACTTCGACAGCCTCGGCGTGCCAAGGCTCGCATAA
PROTEIN sequence
Length: 245
VRRYLGAGILDGGVRIERHEGTPQGGPLSPLLANVLLDDVDRALERNGHRFARYADDCNVYVRSRKAGERVLAALRRLYARLHLVVNETKTAVAPAFGRKFLGFELWKAPGGAVKRKVAKKALATYRQRIRQLTRRSGGQSLAQVSEKLRRYVPGWKGYFRLAQTPSVFAKLDEWLRHRLRALQLKQWKRGSTMYRQMRALGASETDARTVAANSRCWWHNSRLLLNRVLPIAYFDSLGVPRLA*