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berkeley_reactor_200306_biofilm_scaffold_154203_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3365..4846)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037D5600 similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 491.0
  • Bit_score: 617
  • Evalue 1.10e-173
Biofilm dispersion protein BdlA {ECO:0000313|EMBL:CEJ11831.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 493.0
  • Bit_score: 694
  • Evalue 7.50e-197
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 491.0
  • Bit_score: 593
  • Evalue 4.70e-167

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 1482
ATGCTGATGGTCTCAACCCGGAAGGTCTGGGAGGCCGGCGCGAAGCTCGCAGCCCTGGACCGGGCGCTGGCCGTGATCGAGTTCGACCTCGCCGGGACCGTGCTCACCGCCAACGAGAATTTCCTGAGGGCGATGGGCTATGCCCTGCCGGAGGTCGTCGGCAAGCACCACAGCCTGTTCGTCGACCCTGCCTACGCCCACAGCGCGGAGTACAAGGCGTTCTGGGATCGGCTGCGGGCCGGCGAGTTCCAGGCCGCGCAGTTCCGGCGCCTCGCCAAGGGCGGCCGCGAGGTCTGGATCGAGGCCTCCTACAACCCCGTGCTCGGGCGTGGCGGCAAGCCCATCAAGGTGGTGAAGGTCGCCACCGACATTTCACGCCAGAAGGCCGAGGACGCCGAGCGGGCCGGCCAGGTCGCCGCGATCCGCAAGTCGCAGGCGGTGATCGAGTTCGCGCTCGACGGCACCGTCCTCGACGCCAACGCCAATTTCCTCGACGCCATGGGGTACTCGCTCGAGGAAGTGCGGGGGCGCCATCATGCCATGTTCGTCGAGCCGGCGCAGCGCGACAGCCAGGACTATGCCCGCTTCTGGGCGGCGCTGCAGCGCGGCGAATATCAGGCCGGACAGTACAAGCGCCTCGGCAAGGGCGGCCGCGAGGTCTGGATCGAGGCCTCCTACAATCCGATCCTCGATGCCGCGGGCCGGCCGCTCAAGGTGGTGAAGTTCGCCACCGACATCACCGCGCAGGTCAGGCTCCTCGCCGACCTGCAACGCCTGATCGACCAGAACTTCACCGAGATCGACCTGGCGGTCGGCCGAGCGGCCGACCAGTCGAGCGCCGCCATCGAAGCGGCGCATGCGACCAGGGGCACGGTCCAGACCGTGGCCGCCGCGGCGGAGGAGCTGGCGGCCTCGGTGGCGGAAATCGCGGAGAGCATGGCCAAGTCGCGGGCGGCCACCGACAGCGCCTTCGAGCACGTCGCCGCCGCCGGCGACTTCACCCGCCGCCTCTCCGCCGCCGCGGCCGCCATGGGCGGCATCGTCGGGCTGATCCAGAGCATCGCGGCGCAGATCAACCTGCTCGCCCTCAACGCCACCATCGAGTCGGCCCGGGCCGGGGAGGCCGGGCGCGGCTTCGCCGTGGTCGCCCAGGAGGTCAAGACCCTCGCCAACCAGGCGGCCAAGGCCACCGAGCAGATCGGCGCCGAAATCAACGGCGTCCAGACCATTGCCGGCGAGGTGGTGGCCGCGCTCGACTCGATCCGCGGCTCCGTCGACATCATGCGCAGCACGGTCGTCGCCACTGCCGCCTCGGTGGAGGAGCAGAGCGCGGTGACGCGCGACATGTCGGTGAACATGCAGGGCACGTCCCAGGCCGTCGCCACCATCTCCGACAGCATCGCCTCGATCTCGGCGGCCGTGACCCAGGTCTCCGGCGCGGTTGCCACCACCCGCGAGGCGGCGAAGGTGCTGGCGCGGTGA
PROTEIN sequence
Length: 494
MLMVSTRKVWEAGAKLAALDRALAVIEFDLAGTVLTANENFLRAMGYALPEVVGKHHSLFVDPAYAHSAEYKAFWDRLRAGEFQAAQFRRLAKGGREVWIEASYNPVLGRGGKPIKVVKVATDISRQKAEDAERAGQVAAIRKSQAVIEFALDGTVLDANANFLDAMGYSLEEVRGRHHAMFVEPAQRDSQDYARFWAALQRGEYQAGQYKRLGKGGREVWIEASYNPILDAAGRPLKVVKFATDITAQVRLLADLQRLIDQNFTEIDLAVGRAADQSSAAIEAAHATRGTVQTVAAAAEELAASVAEIAESMAKSRAATDSAFEHVAAAGDFTRRLSAAAAAMGGIVGLIQSIAAQINLLALNATIESARAGEAGRGFAVVAQEVKTLANQAAKATEQIGAEINGVQTIAGEVVAALDSIRGSVDIMRSTVVATAASVEEQSAVTRDMSVNMQGTSQAVATISDSIASISAAVTQVSGAVATTREAAKVLAR*