ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_154203_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(5069..5497)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003775BDC similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 142.0
  • Bit_score: 219
  • Evalue 1.10e-54
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 141.0
  • Bit_score: 219
  • Evalue 5.30e-55
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEH86765.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 141.0
  • Bit_score: 219
  • Evalue 2.70e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGCCGCTTCCCCTGGACGACCAGATCTGCTTCACCCTCTATGCCACCAGCATGGCCATCACCCGCACCTACAAGCCGATGCTGGATGCGATGGGCATCACCTATCCGCAATATCTCGTGCTCAACGTGCTGGGCGAGACCGACGGCGCTACGATCGGCGCTATCGCCGGCCGGCTCGACCTGGAATCGAGCACGGTGACACCGCCGGTGAAGCGACTGGAGCAGGCCGGCCTGGTGACGCGCCAGCGTAGCCACGCCGACGAGCGTCAGGTGCAGGTGCGGCTGACCGAGGCCGGCCGGGCCCTGCTGGCGCAGAGCAAGTGCCTGGGCGAGACCCTGATCGAGCGCTCGGGCATGACGCTGGCCGAAATCGATGGCCTGAACCGCGGGGTCCAGGCGCTGCGCGATGCCCTGGGTAGCGAGCAATAG
PROTEIN sequence
Length: 143
VPLPLDDQICFTLYATSMAITRTYKPMLDAMGITYPQYLVLNVLGETDGATIGAIAGRLDLESSTVTPPVKRLEQAGLVTRQRSHADERQVQVRLTEAGRALLAQSKCLGETLIERSGMTLAEIDGLNRGVQALRDALGSEQ*