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berkeley_reactor_200306_biofilm_scaffold_154203_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9081..10922)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEF5FA related cluster n=1 Tax=unknown RepID=UPI0003CEF5FA similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 612.0
  • Bit_score: 1098
  • Evalue 0.0
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:ESW86248.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 612.0
  • Bit_score: 1098
  • Evalue 0.0
thiamine pyrophosphate protein central region similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 613.0
  • Bit_score: 1054
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
ATGTCGACCATCCGCTGCACCATGGCTCAGGCCGTGGTCCGCTATCTCGTGAACCAGTTCACCGTCGTCGACGGCGAGCGCCTGCCGCTGTTCCCTGGCGTCTTCGCCATCTTCGGCCACGGCAACGTCACCTGCCTGTCCGAGGCGCTGGAGGCGGTCCAGGACGTGCTGCCGACCTGGCGCGGCCAGAACGAGCAGTCGATGGCGCTGGCGGCGATCGGCTTCGCCAAGGCCCGGCGGCGGCGCCAGATCATGGTCGCCGCCACCTCGATCGGCCCGGGCGCGCTCAACATGGTGACCGCCGCCGGCGTCGCCCATTCCAACCGCCTGCCGGTGCTGCTGTTCTCCGGCGACACCTTCGTCAACCGCCGTCCCGACCCGGTGATGCAGCAGGTCGAGCATTTCGGCGATCCCACCATCAACGTCAACGACGCCTTCAAGGCGGTGACGCGTTACTGGGACCGCATCGTCCATCCCGAGCAGATCATCTCGTCGCTGCCGCAGGCCGTCGCCACCCTGCTCGATCCCGGCGATTGCGGCCCGGCCTTCATCGCCCTGCCGCAGGACGTGCAGGAGATTGCCTGGGACTATCCCGCCGCCTTCTTCGAGGAGACCGTCCACGTCGTGCCGCGCCCGCGCGCCGACCGCGACCGCCTCGCCGAGGCGGTGCGCCTGCTGACCGGGGCGAAGCGGCCCCTGATCATCTCCGGCGGCGGCGTGCGCTATTCCGGTGCCGAGGACGTGCTCGGCGCCTTCGCGGCCGAGCACGGCATCCCGTTGGCCGAGACCATCGCCGGCAAGGGCGCGGTGACGCATGACCATCCCGCCCATGTCGGGCCGATCGGCATCGTCGGTTCGACCTCCGCCAATGCGCTGGCCGCCGAGGCCGACGTCATCCTCGCCGTCGGCACGCGGCTGATGGATTTCACCACGGGGTCCTGGACCTGCTTCTCGCCCGAGGCGAAGTTCGTCTCGATCAACGCCGCCCGCTACGATGCCACCAAGCACCGGGCCCTGGCCATCGTCGCCGATGCCCGCGAGACCATCGAAGAGCTGTCGGCGGCGGTGAAGGACTGGAAGGCGGATCCGGCCTGGACCGAAAAGGGCCGCCTCGAATTCGCCCGCTGGAACACCATGCTGGACGGCTTCCAGAAGCCGACCAACGATCCCGTCCCGACCTATGCCCAGGTGGTCGGCGTGGTCAACGCCAAGGCCGGCGAGCGCGACCTCCTGATCGCCGCCGCCGGCGGCCTGCCGGGCGAGGTGATGAAGAACTGGCGCGTCAAGGCGCCGAACACCTTCGACTGCGAGTTCGGCTTTTCCTGCATGGGCTACGAGATTGCCGCCGGCTGGGGCGCGGCCATGGCCGACCCGACCCGCACGCCGATCGTCATGATCGGCGACGGCACCTACATGATGATGAACTCGGACATCTATTCCTCGGTCCTGTCCGGCCACAAGCTGATCATCGTGGTCTGCGACAATGGTGGCTATGCCGTCATCAACCGGCTGCAGAATGCCAAGGGCGTGCCCTCCTTCAACAACCTGATCAGGGATTGCCAGGTGAAGGAGCCGTTCTCGGTCGACTTCGCCAAGCATGCCGAATCCATGGGCGCCTTGACCCGGCATGTCGAGAGCCTGGCCGATCTCGACCGGGCGCTCGACTGGGCCAAGACCACGGACCGCACCACGGTCATCTCGATCGTCTCCGACGCCTTCACCTGGACGCCGGGCGATGCCTGGTGGGATGTCGGCGTGCCGGAGGTCAGCGAGCAGGCCGGCGTGCGCGAGGCCGGCGAGGCCCAGCGCCAGGGCCGCAAGAAGCAGCGCGTCGGCGTCTGA
PROTEIN sequence
Length: 614
MSTIRCTMAQAVVRYLVNQFTVVDGERLPLFPGVFAIFGHGNVTCLSEALEAVQDVLPTWRGQNEQSMALAAIGFAKARRRRQIMVAATSIGPGALNMVTAAGVAHSNRLPVLLFSGDTFVNRRPDPVMQQVEHFGDPTINVNDAFKAVTRYWDRIVHPEQIISSLPQAVATLLDPGDCGPAFIALPQDVQEIAWDYPAAFFEETVHVVPRPRADRDRLAEAVRLLTGAKRPLIISGGGVRYSGAEDVLGAFAAEHGIPLAETIAGKGAVTHDHPAHVGPIGIVGSTSANALAAEADVILAVGTRLMDFTTGSWTCFSPEAKFVSINAARYDATKHRALAIVADARETIEELSAAVKDWKADPAWTEKGRLEFARWNTMLDGFQKPTNDPVPTYAQVVGVVNAKAGERDLLIAAAGGLPGEVMKNWRVKAPNTFDCEFGFSCMGYEIAAGWGAAMADPTRTPIVMIGDGTYMMMNSDIYSSVLSGHKLIIVVCDNGGYAVINRLQNAKGVPSFNNLIRDCQVKEPFSVDFAKHAESMGALTRHVESLADLDRALDWAKTTDRTTVISIVSDAFTWTPGDAWWDVGVPEVSEQAGVREAGEAQRQGRKKQRVGV*