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berkeley_reactor_200306_biofilm_scaffold_157852_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1141..2304)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: hippocampus abundant transcript 1 protein-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C180EC similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 385.0
  • Bit_score: 545
  • Evalue 4.10e-152
Major facilitator superfamily protein {ECO:0000313|EMBL:EJZ20632.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 388.0
  • Bit_score: 531
  • Evalue 6.60e-148
tetA; class A tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 382.0
  • Bit_score: 434
  • Evalue 1.70e-119

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGACCCGGGCGCTCGCCATCATCCTGACCATCGTGACGCTGGATGCGGCGGGCATCGGCCTCACCATGCCGATCATGCCGCGCCTGCTGCGCGAGGTCGGCCACAGCGGCGATCTCGGCTGGCGCTACGGCGCCTTTCTCGGGCTCTATGCGCTGATGCAGTTCCTGTGCGCGCCGCTGCTCGGTGCCCTGTCGGACCGGGCCGGCCGCCGGCCCGTGCTGCTGCTGTCGCTCGCCGGCGCCGCGCTCGACTATCTCGTGCTGGCGGCCTCGCCCTGGCTCTGGCTGCTGTTCGTCGGCCGCGCGGTCGCCGGGATCACCGGCGCGAGCATGGCGGTGGCCTCCGCCTGCATCGCCGACGTCACGCCCGAGGCGCAGCGCGCCCGCCGGTTCGGCCAGCTCAGCGCCTGCTTCGGCCTGGGCTTCATCGCCGGGCCCGCGCTCGGCGGCCTGCTCGGCGCGATCTCGGTGCGTGCGCCCTTCGTCGCGGCGGCCGCGCTCAACGGCGTCACCCTGGTCGGCGCCCTCATGGCCCTGCCGGAGACCGCGAAAGCCGGCGCGGCGCCAGCCGTCCTTCTCAACCCGCTGGCGCCGCTGCGCTGGGCGCTGAGCTTTCCGGCGCTCTCGGCGCTGATCGGCGCCTATCTCGTGCTCGCCCTGGTCGGCGAGGTCGGCGGCACGATCTGGGTGCTCTACGGCGAAGACAAGTTCGGCTGGGATCCCTTCACCATCGGCGTCTCCCTCGCCGGCTTCGGCCTGTTCCACGCCCTCGCCCAGGCCTTCGTCGCCGGTCCGATCGCCGAGCGCTGGGGCGAGCGGCGCGCCCTCGCGGTCGGCATCGCCGCCGACAGCGCCGCCTATGGCCTGATCGCCGTGGCGGCGCAGGGCTGGATGGCCTTCCTGCTGCTGCCGTTGTTCTGCCTCGGCGGCATCGGCGCGCCGGCGCTGCAATCGCTGCTGGCGGCCGAGGTGGACGGCGAGCAGCAGGGACGCCTGCAGGGCGTGCTGGCGAGCGTGACGAGCCTCGCCTCGATCCTCGGCCCGCTGCTGATCAGCAGCCTGTACTTCGCGTCCCGCGCGAGCTTCCCCGGCCTGGTGTGGCTCGGCGGGGCGGCGCTGTATCTCGTCTGCCTGCCGCTGCTGTTCGGCCGGCCGTCCCGCTGA
PROTEIN sequence
Length: 388
MTRALAIILTIVTLDAAGIGLTMPIMPRLLREVGHSGDLGWRYGAFLGLYALMQFLCAPLLGALSDRAGRRPVLLLSLAGAALDYLVLAASPWLWLLFVGRAVAGITGASMAVASACIADVTPEAQRARRFGQLSACFGLGFIAGPALGGLLGAISVRAPFVAAAALNGVTLVGALMALPETAKAGAAPAVLLNPLAPLRWALSFPALSALIGAYLVLALVGEVGGTIWVLYGEDKFGWDPFTIGVSLAGFGLFHALAQAFVAGPIAERWGERRALAVGIAADSAAYGLIAVAAQGWMAFLLLPLFCLGGIGAPALQSLLAAEVDGEQQGRLQGVLASVTSLASILGPLLISSLYFASRASFPGLVWLGGAALYLVCLPLLFGRPSR*