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berkeley_reactor_200306_biofilm_scaffold_157852_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2379..2990

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline repressor protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUU8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 239
  • Evalue 2.50e-60
Tetracycline repressor protein {ECO:0000313|EMBL:ENN84244.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 239
  • Evalue 3.50e-60
tetR; tetracycline repressor protein, class A similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 197.0
  • Bit_score: 189
  • Evalue 5.00e-46

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAAGGTCGACCGCAGCCGGATCGTCGACGAAGCGCTCCGCCTCCTCAACGAGGTCGGCATCGACGGGTTGTCGACGCGGCTGCTGGCCGAGCGGCTCGGGGTGCGGCAGCCGGCGCTCTACTGGCACTTTCCCGGCAAGCGTGCCCTGCTGGCGGCGATGAACCGGGAGATCCTGGCGCGCGGGCAGACATCGCGGCCGCCGCGGCCCGGCGAGGACTGGCGCGGCTTCCTGGCCGAGGATGCCCGCAGCTTCCGCCGCGCGCTCACGGCCTATCGCGACGGCGCGCGGGTCCATGCCGGCAGCGAGCCGGATCCGGACGAGGCCGGCCACGTGGAGGTGATGCTGCGCTTCCTCGCCGGAGCCGGCATGGCCGCGCCCTCGGCGCTGCAGCTCCTCATCGCCCTCGGCCGCTACACCGTCGGCTGCGTGCTGGAGGAGCAGGCGGCGCCGGCTCCCGGGACCGAGCCGACCGGGCTCGATGCAGCGGCGCAGGACCGCCCGCTGCTCGCCGGCGCCCTCGCCGCCTATCGCGCGGGCGGGCACGAGGCCGCCTTCGAGGCCGGCCTGGCGCTCCTGCTCGACGGGGCGGCGGCCGCGGTCGGCAGCTGA
PROTEIN sequence
Length: 204
MKVDRSRIVDEALRLLNEVGIDGLSTRLLAERLGVRQPALYWHFPGKRALLAAMNREILARGQTSRPPRPGEDWRGFLAEDARSFRRALTAYRDGARVHAGSEPDPDEAGHVEVMLRFLAGAGMAAPSALQLLIALGRYTVGCVLEEQAAPAPGTEPTGLDAAAQDRPLLAGALAAYRAGGHEAAFEAGLALLLDGAAAAVGS*