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berkeley_reactor_200306_biofilm_scaffold_157852_33

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 32154..33224

Top 3 Functional Annotations

Value Algorithm Source
Polyamine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F030_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 356.0
  • Bit_score: 376
  • Evalue 2.30e-101
Putrescine transporter subunit: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX36143.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 354.0
  • Bit_score: 385
  • Evalue 5.40e-104
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 329.0
  • Bit_score: 315
  • Evalue 1.80e-83

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAGCTTTCTCGGCATAAGCGGCCTCGCCAAGTCCTACGGCACCGTCACGGCGCTCGGCGGCATCGACCTTGCGGTCGAGAAGGGCGAGTTCGTGACGCTGCTCGGGCCCTCGGGCTCGGGCAAGACGACGCTGCTGATGGCGATCGGCGGCTTCGTGCTCGCCGATCGCGGCGTGATCAGCCTCATGAGCCGGGACATCACCCGGCTCGACCCGGAGGACCGCGACCTCGGCCTGGTGTTCCAGGGCTATGCGCTGTTCCCGCACATGAGCGTGGCCGAGAATATCGCCTTCCCGCTGGAGATCCGGCGCTGGCCGCGCCCGCGCATCGCGGCGCGGGTCGAGGAGATGCTGGCGCTGGTCGGCCTGGCGGCGCTCGCCGGGCGCCGGCCGCGCGAGCTCTCCGGCGGCCAGCAGCAGCGTGTGGCGCTGGCCCGGGCGCTGTCCTTCGGGCCGGAGCTGCTGCTCCTCGACGAGCCGCTCTCGGCGCTCGACCGCACCTTGCGCGAGAGCATGCAGCGCGAGCTGAAGCGCCTGCACCGGGAGACCGGGGTGACCTTCGTCTACGTCACCCACGACCAGGAGGAGGCGATCTCGATGTCGGATCGCATCGCCGTGTTCCGGCAGGGGCGGATCGAGCAGATCGGCACGCCGCGGCAGATGTACGGCCGGCCGGCGACGCGCTTCGTCGCCGAGTTCCTCGGCATCAACAACCTGTTCGAGGGCCGGGTGGAGGCCGGGCCCGGCGGCCGCGCCATCCGCACCTTCGCCGGCCTGCTGCCGATCGGCCGGGCGAGCGACGGCACGCCGCTCGTCGCCGGCGCGCCGGCGACGCTGTGGGTCAGGCCCGAGCATGCGAGCCTGGCGCCCGTGCCCGAGGCCGTGGCAGTCAGCGCCGTGATCCGCGACGTCGCCTTCCTCGGGGCGCATGACCGGCTGGTGCTGCAGCCGGACGGCGGGCCCGAGCTGATCGTGCAGTTCCCGGCCGGCGAGGCGGAGCGCTTCCAGCCCGGCGCTCGCCTCACCGTGCACCTGCCGCTCGCCGCCTTCGGCGTGCTGCCGTCCGCCTGA
PROTEIN sequence
Length: 357
MSFLGISGLAKSYGTVTALGGIDLAVEKGEFVTLLGPSGSGKTTLLMAIGGFVLADRGVISLMSRDITRLDPEDRDLGLVFQGYALFPHMSVAENIAFPLEIRRWPRPRIAARVEEMLALVGLAALAGRRPRELSGGQQQRVALARALSFGPELLLLDEPLSALDRTLRESMQRELKRLHRETGVTFVYVTHDQEEAISMSDRIAVFRQGRIEQIGTPRQMYGRPATRFVAEFLGINNLFEGRVEAGPGGRAIRTFAGLLPIGRASDGTPLVAGAPATLWVRPEHASLAPVPEAVAVSAVIRDVAFLGAHDRLVLQPDGGPELIVQFPAGEAERFQPGARLTVHLPLAAFGVLPSA*