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berkeley_reactor_200306_biofilm_scaffold_157852_37

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 37213..38244

Top 3 Functional Annotations

Value Algorithm Source
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QIQ7_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 339.0
  • Bit_score: 553
  • Evalue 1.30e-154
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 339.0
  • Bit_score: 553
  • Evalue 3.80e-155
Possible ABC transport substrate-binding periplasmic protein {ECO:0000313|EMBL:CAE28072.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 339.0
  • Bit_score: 553
  • Evalue 1.90e-154

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGACCACAGCATCCTCAGGACCGGGCAAGCTGTCGCGCCGCGCCCTGCTGCGCACCGCCGGCACGGTCGGCGTCCTCGCCTCGGCCGGCGCTGTCGGGCGCGGCCTGTTCACGCCGGCGATCGCCGGGCCGGCGCCCAAGGTGCGCCTGGCCTGGACCGAGGTCGCGGCCTGCCACTCGCCGCTCGGCTTCGGCGTCGCCAAGGGCATCTACAGCAGGCACAATCTCGATGTGGAGCTGTTCTACCAGGGCGCCAGCGGCCAGACCCTGATCCAGGCGCTCGCCACCGGCAAGGCCGATGCCGGCGCCGGCCTGATCGGCGACTGGCTGAAGCCGCTGGAGCAGGGCTTCGACGTCAAGCTCTTCGTCGGCTCGCATGGCGGCTGCCAGCGCCTGCTGGCGTCCAAGGCCTCGGGCGTGACCGACCTTGCCGGCGTCAAGGGCAAGACCATCGCCACCTATGGCATCGGCGCCCCGCCGCAGGTCGCCTTCCAGGTGACGCTGGCCAAGGCCGGCATCGACCCGGAGACCGACGTGACCTGGAAGGCGGTGCCGTTCGACCTGGTCGGCGAGTCCGTCAATCGCGGCGAGGCCGACCTCGCCGCCCATCTCGACCCCTGGGCCTATTCGATCGAGAAGCAGTTCGGCTTCGTGAAGCTCGCCGATACCCAGACCGGCGTCTACGAGGGCCACACCTGCTGCGTGCTCGGCGCCAACGGGCCGTTCCTGGAGGCCAATCGCGACGCGCTGCGGCGCCTGGCCGAGGCCAATATCGAGGTGCACGAATACACCGCCGCCCATCCTGAGGAGGTGGCGCAATGGTATTTCGACACGCTGAAGCCGGCCGGCCTCAGCCTCGACGACCTCAAGGCGGTGATCGGCGGCCTCGTCGCCCACAACCACCCGATCGGCCAGCCGCTGGTCGACCAGATCCAGAAATCGGCCGAGGACCTCAAGCTGGTCAAGGTGCTCGACCCCACCACCGACCCGAAGGAATTCGCCGAGCGGGTCACGGTCAACCTGCTGGCCTGA
PROTEIN sequence
Length: 344
MTTASSGPGKLSRRALLRTAGTVGVLASAGAVGRGLFTPAIAGPAPKVRLAWTEVAACHSPLGFGVAKGIYSRHNLDVELFYQGASGQTLIQALATGKADAGAGLIGDWLKPLEQGFDVKLFVGSHGGCQRLLASKASGVTDLAGVKGKTIATYGIGAPPQVAFQVTLAKAGIDPETDVTWKAVPFDLVGESVNRGEADLAAHLDPWAYSIEKQFGFVKLADTQTGVYEGHTCCVLGANGPFLEANRDALRRLAEANIEVHEYTAAHPEEVAQWYFDTLKPAGLSLDDLKAVIGGLVAHNHPIGQPLVDQIQKSAEDLKLVKVLDPTTDPKEFAERVTVNLLA*