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berkeley_reactor_200306_biofilm_scaffold_157852_42

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 41373..42041

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D0592F related cluster n=1 Tax=unknown RepID=UPI0003D0592F similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 222.0
  • Bit_score: 294
  • Evalue 5.50e-77
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ25378.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 222.0
  • Bit_score: 294
  • Evalue 7.80e-77
tctD; winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 222.0
  • Bit_score: 276
  • Evalue 4.40e-72

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Taxonomy

Mesorhizobium sp. L2C067A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCGGATCCTGCTTGTCGAGGACACGATTGACGTCGGCGAGGCGATCGTCGCCTGCTTCGAGCGCATGGGGCACGGCGTCGACTGGGAGACCGACGGCACCACGGCGTTCGAGCTCGTCGAGGTGCAGTCCTACGACCTGATCATCCTCGACGTGACGCTGCCGGGGCGCGACGGCTTCGACATCCTGCAGCGGCTGAGGGCCCTCCGGCGCGACACGCCGGTGCTGGTCGTCACCGCGCGCTCCCAGGTCGACGACCGCGTCGGCGCCCTCGACCTCGGGGCCGACGACTATCTCGTCAAGCCTTTCGACTTCCGCGAGCTGGAGGCGCGGGCCCGCGCCCTGCTGCGCCGGCGCCACGGCCAGAGCGTCAACATCCTCGCCTGCGGCGACATCGTGCTCGACCAGGCGACGCGCAGCGTCAAGGTGGCGGACCGGCCGGTGGACCTGACGCGGCGCGAGATCGCCGTGCTGGAGGTGCTGATGGCCCAGCCCCAGCGCGTCCTCGCCAAGGAGGCGATCCTCGACCAGGTGTTCGGCTTCGACGAGTCGGTGCACGCCAACGCGGTCGAGCTCTACATCGCCCGGCTCAGGCGCAAGCTCACGGGCGCCAGGGCCGAGATCCGCACCCTGCGCGGCCTCGGCTACCGGATCCTCGCGCGTGACTGA
PROTEIN sequence
Length: 223
VRILLVEDTIDVGEAIVACFERMGHGVDWETDGTTAFELVEVQSYDLIILDVTLPGRDGFDILQRLRALRRDTPVLVVTARSQVDDRVGALDLGADDYLVKPFDFRELEARARALLRRRHGQSVNILACGDIVLDQATRSVKVADRPVDLTRREIAVLEVLMAQPQRVLAKEAILDQVFGFDESVHANAVELYIARLRRKLTGARAEIRTLRGLGYRILARD*