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berkeley_reactor_200306_biofilm_scaffold_157852_49

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(47104..49011)

Top 3 Functional Annotations

Value Algorithm Source
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 678.0
  • Bit_score: 818
  • Evalue 5.80e-234
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00037C156D similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 645.0
  • Bit_score: 885
  • Evalue 2.70e-254
SufS subfamily cysteine desulfurase similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 678.0
  • Bit_score: 818
  • Evalue 1.20e-234

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGTCGTCACCAACGCCGCCTTCCCCGCCGTCCTGGCCCGCCCCCGACGTCATCGCCCAGCTCGCCAACGCCCTGTTCCAGGCCGGGCCGGGGGAGCCGCCCGGCCTGCCGCTGGCCCCGACCCTGCCGGCCTCGCCGCCGAGCCCGACGGTCGTCCCCGCGTCCTCCGTCGTCACCTCCGTGGCGCCGCTCGCTCCGGCGCAGCCCCCGGTCGGCCCGCCCGACCTGCCGCCGGTGACCATTCCCTCCGTGGTGCCGACGCCGACCATCCCGCCACCGACGCCGCCGGCGGCGCTCGCCGGCACGGTGCCCTCGCCCGTCTCCGGCTCGCCGGCCTCGCCGCCTGGCCTGCCCCAGCCCGGCGGCTCGCCCGGCGTGTTCCTGCCGCCGGTGCCCTCGCCCTTCGACATCGGCGCCCTGCCGCAATCCCTGCGCGATCTCCTCGCCCTGGTGCCGCCGGATCATGCCGGGCGGCCGCCGGCCGTCGAACCGCCGGCGGCAGCCGCGCCGGCCGGTCTCGGCGGGACGGTGCCCGGCATCTATTTTCCGCGCGACGGTGAGACGCTGCCCGCGGCGAACGAGGTGCTGGCGCCGCCGCGGGCGCCTGCCCCCGATCTCGGCGGCCTGACGCCGGGCCTGCGCCCCGAGCTCGTGCCCGACCTCGGCACGTCGCACCGACCCTTCGACGCCGGCTCGGTCAAGCGCGACTTCCCGATCCTGCAGCAGCAGGTGCACGGCAAGCCGCTGATCTGGCTCGACAATGCCGCGACCACCCAGAAGCCGCAGGCGGTGATCGACCGGCTGTCTCATTTCTACGAATATGAGAATTCCAACATCCACCGCGCCGCCCACACCCTGGCCGCCCGCGCCACGGATGCCTATGAATCCGCACGCGAAAAGGTCCGCCGCTTCCTCAATGCCGGCTCGACCAAGGACATCGTCTTCGTCCGCGGCACCACGGAGGCGATCAACCTGGTGGCGCAGGCCTGGGGCCGGCGCAACGTCAAGGCCGGCGACGAGATCGTCATCACCTGGCTGGAGCACCACGCCAACATCGTGCCCTGGCAGATGCTCTGCGCCGAGGTGGGCGCGCGCCTGCGCGTCGCGCCGGTGGACGACACCGGCCAGGTGATCCTGGAAGAGTACGAGAAGCTGCTGTCGCCGAGGACCCGCATCGTCTCGATCACGCAGGTCTCCAACGCGCTCGGCACCGTCGTGCCGGTGCGCGAGATGACGGCCATGGCCAAGCGCCACGGCGCCACGGTGCTGGTCGACGGCGCCCAGTCGGTGTCGCACATGCCCACCGACGTCCAGGCGATCGGCTGCGACTTCTTCGTCTTCTCCGGCCACAAGGTGTTCGGCCCCACCGGCATCGGCGTCGTCTACGGCCGGCCGGACGTGCTGGCGCACATGCCGCCCTGGCAGGGCGGCGGCAACATGATCGCCGACGTCACCTTCGAGAAGACCGTCTACCAGGGCCCGCCGGAGCGCTTCGAGGCTGGCACAGGCAATATCGCCGACGCCGTCGGCCTCGGCGCCGCCATCGACTATGTCGAGGCGATCGGCATGCCCGTCATCGCCGCCTACGAGCACGAGCTCCTCGTCTACGCCACGGAGACGATGCTGGCGGTGCCGGGCCTGAAGCTGATCGGCACGGCGAAGGAGAAGGCGAGCGTGCTCTCCTTCGTGCTCGACGGCTGCCGCACCCAGGATGTCGGCGTGGCGCTGGACCGCGAAGGCATCGCCGTGCGCGCCGGCCATCATTGTGCCCAGCCGATCTTGCGCCGCTTCGGGCTGGAAACTACGGTGCGTCCCTCCCTCGCCTTCTACAACACCCGCGAGGATGTCGATGCGCTGGTGACGGCGCTGCAGCGCATCCAGAGCGGCCGCGGATATCGCCTCGGATGA
PROTEIN sequence
Length: 636
MSSPTPPSPPSWPAPDVIAQLANALFQAGPGEPPGLPLAPTLPASPPSPTVVPASSVVTSVAPLAPAQPPVGPPDLPPVTIPSVVPTPTIPPPTPPAALAGTVPSPVSGSPASPPGLPQPGGSPGVFLPPVPSPFDIGALPQSLRDLLALVPPDHAGRPPAVEPPAAAAPAGLGGTVPGIYFPRDGETLPAANEVLAPPRAPAPDLGGLTPGLRPELVPDLGTSHRPFDAGSVKRDFPILQQQVHGKPLIWLDNAATTQKPQAVIDRLSHFYEYENSNIHRAAHTLAARATDAYESAREKVRRFLNAGSTKDIVFVRGTTEAINLVAQAWGRRNVKAGDEIVITWLEHHANIVPWQMLCAEVGARLRVAPVDDTGQVILEEYEKLLSPRTRIVSITQVSNALGTVVPVREMTAMAKRHGATVLVDGAQSVSHMPTDVQAIGCDFFVFSGHKVFGPTGIGVVYGRPDVLAHMPPWQGGGNMIADVTFEKTVYQGPPERFEAGTGNIADAVGLGAAIDYVEAIGMPVIAAYEHELLVYATETMLAVPGLKLIGTAKEKASVLSFVLDGCRTQDVGVALDREGIAVRAGHHCAQPILRRFGLETTVRPSLAFYNTREDVDALVTALQRIQSGRGYRLG*