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berkeley_reactor_200306_biofilm_scaffold_157852_51

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 50556..51473

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Kaistia granuli RepID=UPI00036F6B7D similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 304.0
  • Bit_score: 458
  • Evalue 4.00e-126
ABC transporter {ECO:0000313|EMBL:KER72943.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 297.0
  • Bit_score: 456
  • Evalue 1.60e-125
substrate binding domain of ABC-type glycine betaine transport system family protein similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 297.0
  • Bit_score: 453
  • Evalue 3.60e-125

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Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGTCCGATCGTTCAAATCCTGGGGTGCGGCGCTGGCGCTGACCCTCCTGGCCGGCACGGCGCAGGCCGCCGATGCCGTGGTGGTGTCCTCGAAGATCGACACCGAGGGCAACCTGCTCGGCAACGTCATCGCCCAGGTGCTGCAGTCGCACGGCATCGCCGTGACCAACAAGATCGGCCTCGGCACCACGCCGATCGTCCGCAAGGCCCTGATCGCGGGCGAGATCGACATCTATCCCGACTATACCGGCAATGCCGGCTTCTTCTTCAACAAGGCGGACGATCCCTTGTGGAAGAACGCCGAGAAGGGCTACGAGGCGGCCAAGACGCTCGACTACGACGCCAACAAGATCGTCTGGCTGACGCCCTCGCCCGCCAACAACACCTGGGCGATCGGGCTGGTCGGCACGGTGGCCGACACCAACCATCTCAAGACGCTCAGCGATTTTGGCAAATACGTCTCGGGCGGCGGCCAGGTGAAGCTCGCCGCCTCGGCCGAGTTCGTCAACAGCGCCGCAGCGCTGCCGGCGTTCCAGACGACCTACGGCTTCGCGCTGAAGCCCGACCAGCTCCTGGTGCTGTCGGGCGGCGATACCTCCGCCACCATCAAGGCGGCGGCCGAGCAGACCGACGGCGTCAACGCCGCCATGGTCTACGGCACGGATGGCGGCATCTCCGCCGCCGGCCTGGTGGTGCTCGACGACGACAAGGGCGTGCAGCCGGTCTATGCGCCGGCGCCGCTGATCCGCGAGGCGGTGCTCAAGGCCCATCCCGAGATCGCCGAGCTCCTGAAGCCGGTCTTCGCAGCCCTGGACCTCAAGACCCTGCAGGCGCTCAACGGCCGCATCCAGGTCAACGGCGAGGCGGCCAAGGACGTGGCGGCCGACTTCCTCAAGTCCAAGGGCTTGGTGAAATAG
PROTEIN sequence
Length: 306
MVRSFKSWGAALALTLLAGTAQAADAVVVSSKIDTEGNLLGNVIAQVLQSHGIAVTNKIGLGTTPIVRKALIAGEIDIYPDYTGNAGFFFNKADDPLWKNAEKGYEAAKTLDYDANKIVWLTPSPANNTWAIGLVGTVADTNHLKTLSDFGKYVSGGGQVKLAASAEFVNSAAALPAFQTTYGFALKPDQLLVLSGGDTSATIKAAAEQTDGVNAAMVYGTDGGISAAGLVVLDDDKGVQPVYAPAPLIREAVLKAHPEIAELLKPVFAALDLKTLQALNGRIQVNGEAAKDVAADFLKSKGLVK*