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berkeley_reactor_200306_planktonic_scaffold_190120

Search features with annotation key words

Displaying items 61-73 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_190120_61
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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81056..82462
DNA (1407bp) protein (469aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029C3_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ82368.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
berkeley_reactor_200306_planktonic_scaffold_190120_62
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(82548..83369)
DNA (822bp) protein (274aa)
Putative uncharacterized protein id=4599461 bin=GWF2_Lentisphaerae_50_93 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prepilin-type N-terminal cleavage/methylation domain
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_190120_63
unknown

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comp(83461..83838)
DNA (378bp) protein (126aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_190120_64
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(84268..89364)
DNA (5097bp) protein (1699aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZX4_9GAMM
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EED39131.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
berkeley_reactor_200306_planktonic_scaffold_190120_65
unknown

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89506..89661
DNA (156bp) protein (52aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_190120_66
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(89673..90332)
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEI2_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF61696.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_190120_67
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(90397..93534)
DNA (3138bp) protein (1046aa)
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA53_9BACT
Histidine kinase {ECO:0000313|EMBL:EEF63394.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component regulator propeller/histidine kinase domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_190120_68
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(93633..94607)
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR4_9BACT
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EEF58187.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oligopeptide/dipeptide ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_190120_69
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(94604..95566)
DNA (963bp) protein (321aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR5_9BACT
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EEF58188.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oligopeptide/dipeptide ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_190120_70
unknown

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comp(95582..95878)
DNA (297bp) protein (99aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_190120_71
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(95882..96970)
DNA (1089bp) protein (363aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR6_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF58189.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oligopeptide transport system permease protein AppC
berkeley_reactor_200306_planktonic_scaffold_190120_72
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(96977..97942)
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR7_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF58190.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter substrate-binding protein
berkeley_reactor_200306_planktonic_scaffold_190120_73
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

98504..103792
DNA (5289bp) protein (1763aa)
PA14 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying items 61-73 of 73 in total

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