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berkeley_reactor_200306_planktonic_scaffold_190120_64

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(84268..89364)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Outer membrane autotransporter barrel domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZX4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 27.7
  • Coverage: 1849.0
  • Bit_score: 402
  • Evalue 1.90e-108
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.1
  • Coverage: 1909.0
  • Bit_score: 438
  • Evalue 5.10e-120
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EED39131.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.7
  • Coverage: 1849.0
  • Bit_score: 402
  • Evalue 2.60e-108

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5097
ATGAACAAGACCCAAAAACCTTATGCTGTTGCCGCCTCAGGCGGTTTTTCGACGAACGCCCGCTGGCGCGTTGCCACGATGCTGGCGGCTTTGGCCGTCGTGCCGCTGGCGCAAGCCGGCGTCTTTGTCAAAGCCAACAACACGGACAATCTCAATCTGGCCACCTCCTGGGTGAACAACGCGGTGCCCGGCGCTGCCGATGTGGCGCAGTGGGACAGCACGGTGAGCGATGCGGGCAACGCCTCGGTTTCGCTCGGCGCAAACGCTTCTTGGTCGGGCATCAAGATTTTGAATCCGGCCGCCGCCATTAACATAGCCAACGATGGCAGCATGCTGACGCTTGGGGCCGATGGCATTGATTTGTCCGCCGCCTCGGTGGGGCTGACCTTGAACAACAACGTGACGTTGTTGGGCAATACCGTGCAGTCCTGGTCCGTTGCTTCCGGTCAGACGCTGGCATTGAATGGAACATTCACCCGCGCGGGCGGAGCCGGCCTGTATCTCGACACATCATTGGGAGGCACCATTAACATCAATGGCGGCACGGCCAGTGCGGCGTTGAATTACTCGCTGGTGAACGGCACCGACGTGGGGGCTTTGGACGCGTCCAAAAACGTGAGCACTGTCGGTGCGGTGATTGGCTATTCGCAATCTTCCACGCCGACTTCGGACCAGGCCGCCGATCAGTATCTGGATGTTGTCAATGGTTCGGGCGGGCCGGCCTCCGATGTCATCGTCAGTTCGGCTTCTTACTACCCGCTCGTGGTGCGTTTCAACACGCCAAATCCCTATCGGAACTACTGGATTTATGATTCGGCCAACCGGAACGAATATATTTCCACGCAAACCACGTTCTTGGTGACCACCAATGTTGGCGCGCAGGACATAATCATCACGGGCACCTATAACACTTTTCGGTGGAACAGTGGAACGGAACTGATTATCAACCAACAAAACACCGCCGGCACCCTGTATGCCAACGGCCCCACTTCGCAGCGCGTCGCCAGTGCCAACAATATCTTGACCAAGTATGGCGCGGGCCGGGCCGTGATGAATACTGCGCTGGCCAACAATGGTCCCATTCGGATTATCGAAGGCGAACTGACGTTGAACAGCACCATCGCGGCCAGTTCATCGGTGCAAGTTGGACCCGCCGGGGTCTTTTCCGGCAGCACGACCATTAATAATCCGGTGACCGTCTTTGGTGGCACCATTCATCCCGGCAGCACCAATGGCCTGGAGGTTCTGACTTTGGGCAATCTCACTTTGAATGCCGGCAGCTCCCTGAGCTTTTACAACACGACCTCGCCGGTGACGAACACCGCCGCCTTGCTGAATCTCACCGGTGCCTGGACCATCGGCGGCCCGGTGAATGTCCGCATTTTGGCAGGCTACACTCCATTGGGGCAATACCCGCTGGTTCATTGGACCAATGCCATCAGCGCCACGGATTTCACCAATTTTACCCTGGCGCAAATGCCTTTGCGCACCACCGGTTATTTGAGCAACAACGTGGCGAATGATTCCATTGACCTGGTGGTCACGAATGTGAATCAACCCATCAAATGGGCAACGGGTAACGGAACCTGGGACGTCAACAGCACTGCCAATTGGGTGGACACCCAGGGCGGTTCAACGACGTATCAACAATCTGAAACGGTGGGAGACCAGGTTTTGTTTAACGACAGCGCACCCGGCACCTCACCCATCACGGTGACTTTGAACCAAAGCGTGGTTCCGGCCGGTGCCACCATTGACGCTGCCAAAGATTATATCATCACCGGCAGCGGTGACATTGCGGGTGGTGGTAGTGTGACCAAGGCCGGCGCCGGCACGCTGACCCTGCAAACCACCAACAGTTTTGCCGGCGGGCTGAACCTCAACGGCGGTGTAGTCAAGTTTGGCAGCTTCGACAACCTCGGTTCCGGCGGCATTAATTTCGGTGGCGGCACATTGCAGTATCCGGCTGGCTTCACCGAAGATCTTTCCACCCGCACCGTCAGCTTCGTATCGGGCCAGGGCACAATTGATGACAATGGAAACAATCTAACTTTTGCCAGCGCCATCGGAAATAATGGTTCCGGCGGTTTTACCAAAATGGGTGCCGGCACCTTGCTTTTGAGCGGCACCAATTCTTACACCGGCCCGACGATCATTGCCCAGGGCACGCTGGCCTTGAATCCCGATGCGTATATTTCAAACAGCTCCGCGATCATGATTGACAGCGGCGCGGTTTTGGATGGGCTTTATTATGGAGGCGCATTTAATCTGACCGGGACGCCCGGGCAAATCCTGGGCGGCGACGGCGCGGTGGCCGGCTATGTGACTTGCGACACGGGGACGTTGATGCCGGGAACGAACGGGATTCCGGGCACGCTGACCTTCAGCAACGATCTCACCTTCAATGGTGGCGTCATTGAAATTGATTTGTCCAACGACCCGGCGCAACGGGACTTGTTGAACATTGAAGGCGGCCTTTACCTCTATGGCGGCACGCTGAACCTGAATGTGCATGGCACGTTGACCAACGGCGTTTACCGCATCATCCGCATGGCTTCTGGCCTTTACAGCGGCGCCGGTTCCTCGGCCAACCTGAAAGTCACAGGGTTCTCTCAACCTGGACAAGTGGCTACCTTGGACGACAGCACACCCAATGAAATTGATGTTATCGTGACGGACGCGGCCAGTGACGATCTGGTTTGGTCGGGGAGCGGCAGTTACTGGGACACCGTCGGCAGCTTGTCCTGGCTGAAGGGCGGCGTCAGTTGGTCGTTTACCAATGGTGACACGGTGACGTTCAATGATTCAGGGCTGGCAACGCCGACGGTTTATTTGCAGTCCGCCGTGCTGCCCAGTTCGGTGACGGTGAACAATAGCGCGGGAGATTACACCTTTGCGGATGGCACCGGCACGGGAGGAGGCAAGATCAGCGGCCTGACTTCGCTGGTGAAGGATGGCACGGGCACGCTGACGGTGGCGACGGAAAATAATTACAGCGGTGCGACCACCATCAAGAACGGCACGTTGCAGATCGGCAGCGGCGGGGCGGGGGGCATTGGTTCCGGTCCGGTGACGAACAATGCCGCGCTGGTTTTCAACCAGGGTGGAGACTACACGGTGAACGGAAAGGTCAGTGGCACGGGCAGCTTGACCCAATCAGGCACGGCAACGTTGACGCTGAAGAGTGCGGCGGATTATACCGGACCGACGACGATCACGTCAGGAACGCTGCAGGTGGGCACGGGTGGATCCGCCGGCGTGCTGATGACCTCGTCCATCACGAATGACGGAACCTTGATTTTAAACAGCACAACGGATTGGAACCTGGCCATGTCCATGACCGGATCAGGCATACTTTGGAAGCAGGGCACCAATACGGTCACATTGACCGGCGCGAACACCCGCACGGGCCAGACCCGGGTTGACGCCGGCAAACTGGTTCTCGGGGCCAGCAATTATGCGACGGGTCCGGCCCGAATTGAAGCGGGTGGCACGCTGGACATCAACGGATTTGACCAGACCTTCGCGGGACTGTCGGGCGGCACCTACAGCGGGCGTCTGGTGAACAACGGCGGCACCGGCACCAATGTGGTGACCATCACCAATGCGGCCACATCCGACAGTGACGTGGTCATCGCTGACAACGACGGTTCGGGAGGCGCGATCGCCGTCGTCAAGCTGGGCGCCGGCGAGCTGATTGAACGTGCGGCCAGCACCTACTCGGGTGGCACCTGGATCAAGGAGGGCACGGTCAATATTCGCACCAGCGGCGCCCTGGGTTCCGGTCCGGTTACGTTCAGCGGCGGCACGCTGACCGTGGCCAACGGCGGCAATGTGACCAATCCGGAAATTATCAGCACCAACGGCACCTTGAACGCCAATGGTAATATCTATGTGAATTGCCCCATCACCGGTGACAGCACCGGGGTGCTAAACATAACGGCGGGTTCCGGCAATACTGTCACGCCCCAGAGCGGATGTGACCTGCGTGGTTTCGCCGGCACCATCCGGGTTCCCGGACCGAACCCGCTCTATTTGCGACTGGATGCGCCGGTGGGCGGGGCAAGCGTCACGTGGGATGTGGGAACGAACTGCACCCTGCTTCAGCGCTCAGGAAATCGGACCACCTATCTCGGTCACATCGTTGGTGGCGATACCTCCATTATTGAGGGCGGTGGCGGCGGCACCACCACCTATATCATCGGCGGTAAAAATCTCAGCGGCGCCTATCCGGGAACGATCCAGGACAATGGCAGCGTGACCACCATTGTGAAGGAGGGAACCGGAACGCTGACGCTCAACGGCACAAACGCCTGGAGCGGCAGCACCATTGTCAGCAACGGTGTGCTGGCGGTGATGGCGCCCGCATCGCTCACCAATTCGGCGGTCATCAGTGTGGCGGCCGCGTCAGCCACGCTGGATGTTTCCCAGTTGACGGTGGACAGCCTTTTCGAGGTCAATTCCGGCCAGACTTTGTCCGGCTTTGGCACCGTTTTGGCCGACAACGTAAAGATGGATGATGGTTCCACACTGAGTGTCGGCCTGCCGACTGGTGTCTTGTCCATGACGAACAACCTGGAAGTGGCGGGTGCCGTGGTCTTCAACCTGGTCCGCACCAACACGCCCAACAGCGGTGAGTTGGTCGTGCCCAATCTGACGATTGATTCAACGGCCACGCTGACCATCACCAATGTTGGTCCCGCGCTGGCCAATGGCGACAAGTTCACGTTGTTTGACAAGGCGGTGAATCCGAATCAGTTTGCGTCGGTGACGTTGCCCGCCACTGATCCCACCGGCACCACCAACTACGTCTGGCAAAATGACCTGGCCGTGGATGGCACCATCACGCTTGTCAGTGGCGGGGTGAGTCCGATCAACCAGAATCCGCCGACGATTCAGACCAGCTTCAGCGGCAACATGCTGTCCTTGAGCTGGCCGACGAATTCCGGCTGGATTCTCCAGATGCAGACCAACAACCTGGCGACCGGTATCAGCAACAACTGGGTGGACGTGTCCGGCAGCGAAAACATGACGTCCACCAACATTACTGTGGATGCCAGCGCCCCCACCGTGTTCTATCGTTTGCGGCTGCCTTGA
PROTEIN sequence
Length: 1699
MNKTQKPYAVAASGGFSTNARWRVATMLAALAVVPLAQAGVFVKANNTDNLNLATSWVNNAVPGAADVAQWDSTVSDAGNASVSLGANASWSGIKILNPAAAINIANDGSMLTLGADGIDLSAASVGLTLNNNVTLLGNTVQSWSVASGQTLALNGTFTRAGGAGLYLDTSLGGTININGGTASAALNYSLVNGTDVGALDASKNVSTVGAVIGYSQSSTPTSDQAADQYLDVVNGSGGPASDVIVSSASYYPLVVRFNTPNPYRNYWIYDSANRNEYISTQTTFLVTTNVGAQDIIITGTYNTFRWNSGTELIINQQNTAGTLYANGPTSQRVASANNILTKYGAGRAVMNTALANNGPIRIIEGELTLNSTIAASSSVQVGPAGVFSGSTTINNPVTVFGGTIHPGSTNGLEVLTLGNLTLNAGSSLSFYNTTSPVTNTAALLNLTGAWTIGGPVNVRILAGYTPLGQYPLVHWTNAISATDFTNFTLAQMPLRTTGYLSNNVANDSIDLVVTNVNQPIKWATGNGTWDVNSTANWVDTQGGSTTYQQSETVGDQVLFNDSAPGTSPITVTLNQSVVPAGATIDAAKDYIITGSGDIAGGGSVTKAGAGTLTLQTTNSFAGGLNLNGGVVKFGSFDNLGSGGINFGGGTLQYPAGFTEDLSTRTVSFVSGQGTIDDNGNNLTFASAIGNNGSGGFTKMGAGTLLLSGTNSYTGPTIIAQGTLALNPDAYISNSSAIMIDSGAVLDGLYYGGAFNLTGTPGQILGGDGAVAGYVTCDTGTLMPGTNGIPGTLTFSNDLTFNGGVIEIDLSNDPAQRDLLNIEGGLYLYGGTLNLNVHGTLTNGVYRIIRMASGLYSGAGSSANLKVTGFSQPGQVATLDDSTPNEIDVIVTDAASDDLVWSGSGSYWDTVGSLSWLKGGVSWSFTNGDTVTFNDSGLATPTVYLQSAVLPSSVTVNNSAGDYTFADGTGTGGGKISGLTSLVKDGTGTLTVATENNYSGATTIKNGTLQIGSGGAGGIGSGPVTNNAALVFNQGGDYTVNGKVSGTGSLTQSGTATLTLKSAADYTGPTTITSGTLQVGTGGSAGVLMTSSITNDGTLILNSTTDWNLAMSMTGSGILWKQGTNTVTLTGANTRTGQTRVDAGKLVLGASNYATGPARIEAGGTLDINGFDQTFAGLSGGTYSGRLVNNGGTGTNVVTITNAATSDSDVVIADNDGSGGAIAVVKLGAGELIERAASTYSGGTWIKEGTVNIRTSGALGSGPVTFSGGTLTVANGGNVTNPEIISTNGTLNANGNIYVNCPITGDSTGVLNITAGSGNTVTPQSGCDLRGFAGTIRVPGPNPLYLRLDAPVGGASVTWDVGTNCTLLQRSGNRTTYLGHIVGGDTSIIEGGGGGTTTYIIGGKNLSGAYPGTIQDNGSVTTIVKEGTGTLTLNGTNAWSGSTIVSNGVLAVMAPASLTNSAVISVAAASATLDVSQLTVDSLFEVNSGQTLSGFGTVLADNVKMDDGSTLSVGLPTGVLSMTNNLEVAGAVVFNLVRTNTPNSGELVVPNLTIDSTATLTITNVGPALANGDKFTLFDKAVNPNQFASVTLPATDPTGTTNYVWQNDLAVDGTITLVSGGVSPINQNPPTIQTSFSGNMLSLSWPTNSGWILQMQTNNLATGISNNWVDVSGSENMTSTNITVDASAPTVFYRLRLP*