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cn_combo_scaffold_76

Alias: RUB134_5

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Displaying items 31-60 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_76_31
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32547..33449)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV53_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96890.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_76_32
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33479..34447
DNA (969bp) protein (323aa)
Serine/threonine protein kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV52_RUBGI
serine/threonine protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:BAL96889.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
cn_combo_scaffold_76_33
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34464..35381
DNA (918bp) protein (306aa)
putative protein phosphatase 2C-type (EC:3.1.3.16)
protein serine/threonine phosphatase n=1 Tax=Caldimonas manganoxidans RepID=UPI000369D7BC
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EHR70530.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;
cn_combo_scaffold_76_34
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35417..36145
DNA (729bp) protein (243aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVI3_9BURK
cn_combo_scaffold_76_35
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


36167..36796
DNA (630bp) protein (210aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
nucleoside-triphosphate diphosphatase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A70B6
deoxyribonucleotide triphosphate pyrophosphatase
cn_combo_scaffold_76_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36789..37997
DNA (1209bp) protein (403aa)
hemN; oxygen-independent coproporphyrinogen III oxidase HemN (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVI1_9BURK
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EGJ12349.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rub
cn_combo_scaffold_76_37
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38011..39102)
DNA (1092bp) protein (364aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=987059 species="Bacteria; Proteobacteria; Betapr
cheB; protein-glutamate methylesterase CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVH9_9BURK
cn_combo_scaffold_76_38
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39144..39815)
DNA (672bp) protein (224aa)
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; B
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV45_RUBGI
cn_combo_scaffold_76_39
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39838..40683)
DNA (846bp) protein (282aa)
cheR; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Chemotaxis protein methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV44_RUBGI
cn_combo_scaffold_76_40
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40842..41645
DNA (804bp) protein (268aa)
Diguanylate cyclase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV43_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL96880.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245
cn_combo_scaffold_76_41
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41638..42420
DNA (783bp) protein (261aa)
Site-determining protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVH5_9BURK
fleN; flagellar synthesis regulator FleN
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = AT
cn_combo_scaffold_76_42
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42550..43941
DNA (1392bp) protein (464aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X13_RHOFD
iron-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
iron-containing alcohol dehydrogenase
cn_combo_scaffold_76_43
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43966..46173
DNA (2208bp) protein (736aa)
Putative dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X14_RHOFD
putative dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
putative dehydrogenase
cn_combo_scaffold_76_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46185..46865)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV37_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96874.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_76_45
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46862..47536)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVH2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12340.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
radC; DNA repair protein RadC
cn_combo_scaffold_76_46
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47651..48106
DNA (456bp) protein (152aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=864051 species="Bacteria; Proteobacteria; Betapro
fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase FkpB (EC:5.2.1.8)
peptidylprolyl isomerase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003809758
cn_combo_scaffold_76_47
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48103..49056
DNA (954bp) protein (318aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV34_RUBGI
cn_combo_scaffold_76_48
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49131..50426
DNA (1296bp) protein (432aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase SerS (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVG9_9BURK
cn_combo_scaffold_76_trna_1
unknown

Not on your lists

50493..50579
DNA (87bp)
transferRNA
cn_combo_scaffold_76_49
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50698..52014)
DNA (1317bp) protein (439aa)
Tetratricopeptide repeat protein 38 id=1267911 bin=GWE1_Burkholderiales_65_30 species=Halomonas boliviensis genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
cn_combo_scaffold_76_50
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52235..55588
DNA (3354bp) protein (1118aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubriv
dnaE; error-prone DNA polymerase DnaE (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNR6_RUBGI
cn_combo_scaffold_76_51
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55614..56312
DNA (699bp) protein (233aa)
putative esterase (EC:3.1.-.-)
Putative esterase {ECO:0000313|EMBL:BAL94654.1}; EC=3.1.-.- {ECO:0000313|EMBL:BAL94654.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="R
Putative esterase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNR7_RUBGI
cn_combo_scaffold_76_52
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56912..57703
DNA (792bp) protein (264aa)
UPF0246 protein RGE_13140 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNR8_RUBGI
hypothetical protein
UPF0246 protein RGE_13140 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain N
cn_combo_scaffold_76_53
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57777..58472
DNA (696bp) protein (232aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ACB36629.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ACB36629.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.
Carboxymethylenebutenolidase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0F0_LEPCP
cn_combo_scaffold_76_54
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58513..59136
DNA (624bp) protein (208aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=1271052 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
two component LuxR family transcriptional regulator
cn_combo_scaffold_76_55
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59145..59534
DNA (390bp) protein (130aa)
PAS protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DWT0_THIND
luxQ_[H]; PAS protein
Tax=BJP_IG2103_Dechloromonas_63_51
cn_combo_scaffold_76_56
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59613..62111
DNA (2499bp) protein (833aa)
AMP-dependent synthetase and ligase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPR5_RUBGI
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAL95002.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (st
cn_combo_scaffold_76_57
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62163..64421)
DNA (2259bp) protein (753aa)
response regulator receiver sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQE3_9BURK
Histidine kinase {ECO:0000313|EMBL:EHR71273.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cn_combo_scaffold_76_58
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64510..65241)
DNA (732bp) protein (244aa)
Response regulator n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BA87_RUBGE
response regulator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
response regulator
cn_combo_scaffold_76_59
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65321..66091
DNA (771bp) protein (257aa)
surE; stationary-phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=983917 spec
5'-nucleotidase SurE n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=SURE_RUBGI
Displaying items 31-60 of 177 in total

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