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cn_combo_scaffold_76

Alias: RUB134_5

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_76_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..794)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDE8_BRAJP
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX39848.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteri
ABC transporter
cn_combo_scaffold_76_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(791..2635)
DNA (1845bp) protein (615aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJL7_NITHX
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:CDX39850.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
ABC transporter
cn_combo_scaffold_76_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2673..3548)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39852.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
livH3; high-affinity branched-chain amino acid ABC transporter permease LivH
cn_combo_scaffold_76_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3671..5032)
DNA (1362bp) protein (454aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QJZ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39856.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
twin-arginine translocation pathway signal
cn_combo_scaffold_76_5
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5357..6931
DNA (1575bp) protein (525aa)
Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWE1_9PROT
XRE family transcriptional regulator protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
XRE family transcriptional regulator
cn_combo_scaffold_76_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7037..7405
DNA (369bp) protein (123aa)
Protein containing response regulator domain, but no DNA binding domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWD1_9PROT
DNA-binding response regulator Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
DNA-binding response regulator
cn_combo_scaffold_76_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7421..7747
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT79_9PROT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
cn_combo_scaffold_76_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..10476
DNA (2730bp) protein (910aa)
Na+/solute symporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWD3_9PROT
Na+/solute symporter Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Na+/solute symporter
cn_combo_scaffold_76_9
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10493..12088)
DNA (1596bp) protein (532aa)
glucose-methanol-choline oxidoreductase; K00119 [EC:1.1.99.-] Tax=GWA2_Curvibacter_64_110_curated
Glucose-methanol-choline oxidoreductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T798_ACIDE
choline dehydrogenase
cn_combo_scaffold_76_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12275..14137
DNA (1863bp) protein (621aa)
ABC transporter permease and ATP-binding protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR70_9BURK
ABC transporter permease and ATP-binding protein {ECO:0000313|EMBL:EGJ10838.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax be
ABC transporter permease/ATP-binding protein
cn_combo_scaffold_76_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14360..15208)
DNA (849bp) protein (283aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=232721 species="Ba
Formyltetrahydrofolate deformylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W355_ACISJ
purU; formyltetrahydrofolate deformylase
cn_combo_scaffold_76_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15253..16392)
DNA (1140bp) protein (380aa)
FAD-binding oxidoreductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSG2_9BURK
FAD-binding oxidoreductase {ECO:0000313|EMBL:EGJ11280.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = AT
putative oxidoreductase rbh
cn_combo_scaffold_76_13
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16385..17206)
DNA (822bp) protein (274aa)
Class V aminotransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR58_9BURK
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:BAM00294.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM
cn_combo_scaffold_76_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17271..18737
DNA (1467bp) protein (489aa)
cytochrome oxidase subunit I n=1 Tax=Dyella japonica RepID=UPI0002E4C53F
cbb3-type cytochrome c oxidase subunit I
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AIF48072.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyell
cn_combo_scaffold_76_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18748..19407
DNA (660bp) protein (220aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWE4_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIM03786.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
cytochrome c oxidase, cbb3-type, subunit II
cn_combo_scaffold_76_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19404..19595
DNA (192bp) protein (64aa)
Cytochrome c oxidase subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWE3_9GAMM
Cbb3-type cytochrome oxidase component FixQ Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cytochrome C oxidase
cn_combo_scaffold_76_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19592..20506
DNA (915bp) protein (305aa)
cytochrome-cbb3 oxidase subunit III n=1 Tax=Dyella ginsengisoli RepID=UPI00034D368E
cytochrome c oxidase, cbb3-type, subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
cn_combo_scaffold_76_18
unknown

Not on your lists

20511..20741
DNA (231bp) protein (77aa)

This feature has no annotations

cn_combo_scaffold_76_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20738..23197
DNA (2460bp) protein (820aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A11AA
Uncharacterized protein {ECO:0000313|EMBL:KGI78378.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
heavy metal translocating P-type ATPase
cn_combo_scaffold_76_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23194..23433
DNA (240bp) protein (80aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK13_9GAMM
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EIL99804.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;
cytochrome oxidase maturation protein, cbb3-type
cn_combo_scaffold_76_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23430..24152
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036807B5
Uncharacterized protein {ECO:0000313|EMBL:KGI77863.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
cn_combo_scaffold_76_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24183..25265)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
serC; phosphoserine aminotransferase SerC (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQN9_9BURK
cn_combo_scaffold_76_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25410..25853
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HND7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94524.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_76_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25947..26630
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNG8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94555.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_76_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26676..28118
DNA (1443bp) protein (481aa)
Exonuclease I {ECO:0000313|EMBL:EGJ10639.1}; EC=3.1.11.1 {ECO:0000313|EMBL:EGJ10639.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubr
sbcB; exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQM1_9BURK
cn_combo_scaffold_76_26
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28198..29031)
DNA (834bp) protein (278aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
pantothenate synthetase (EC:6.3.2.1)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037EF5B1
cn_combo_scaffold_76_27
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29085..29891)
DNA (807bp) protein (269aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase) n=1 Tax=mine drainage metagenome RepID=E6PVX5_9ZZZZ
cn_combo_scaffold_76_28
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30434..30577)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJC8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95667.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_76_29
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30603..31868)
DNA (1266bp) protein (422aa)
Putative HipA protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJC7_METPP
HipA protein
Putative HipA protein {ECO:0000313|EMBL:ABM95666.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1)
cn_combo_scaffold_76_30
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31879..32163)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJC6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95665.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
Displaying items 1-30 of 177 in total

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