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cn_combo_scaffold_984

Alias: RUB134_22

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_984_1
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..365)
DNA (351bp) protein (117aa)
single-stranded DNA-binding protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6EC52
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_984_2
unknown

Not on your lists

comp(362..994)
DNA (633bp) protein (211aa)

This feature has no annotations

cn_combo_scaffold_984_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(991..2394)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLG7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDW95178.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
cn_combo_scaffold_984_4
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2391..3350)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y3M9_LEPCP
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB35732.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5116
cn_combo_scaffold_984_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3586..3843)
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_984_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3942..4496)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:ACB35727.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5116
cn_combo_scaffold_984_7
unknown

Not on your lists

comp(4596..4733)
DNA (138bp) protein (46aa)

This feature has no annotations

cn_combo_scaffold_984_8
unknown

Not on your lists

comp(4730..4984)
DNA (255bp) protein (85aa)

This feature has no annotations

cn_combo_scaffold_984_9
unknown

Not on your lists

comp(5104..5319)
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_984_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5334..6572)
DNA (1239bp) protein (413aa)
Integrase family protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y3D8_LEPCP
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACB34466.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 511
cn_combo_scaffold_984_trna_1
unknown

Not on your lists

comp(6758..6829)
DNA (72bp)
transferRNA
cn_combo_scaffold_984_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6902..7303)
DNA (402bp) protein (134aa)
Transcriptional regulator, ArsR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5V6_LEPCP
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
ArsR family transcriptional regulator
cn_combo_scaffold_984_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7300..7758)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5V7_LEPCP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_984_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7804..8862)
DNA (1059bp) protein (353aa)
Beta-lactamase domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6J6_LEPCP
beta-lactamase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
beta-lactamase domain-containing protein
cn_combo_scaffold_984_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9074..10807)
DNA (1734bp) protein (578aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQS8_9BURK
5'-nucleotidase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
5'-nucleotidase domain-containing protein
cn_combo_scaffold_984_15
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10878..11531)
DNA (654bp) protein (218aa)
Conserved hypothetical transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIJ9_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS56069.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
cn_combo_scaffold_984_16
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11548..12348)
DNA (801bp) protein (267aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|P
sulfur oxidation protein SoxA n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B67AD7
hypothetical protein
cn_combo_scaffold_984_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..12748)
DNA (312bp) protein (104aa)
Sulphur oxidation protein SoxZ n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K7_LEPCP
sulfur oxidation protein SoxZ Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
sulfur oxidation protein
cn_combo_scaffold_984_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12797..13255)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K8_LEPCP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_984_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13431..14540)
DNA (1110bp) protein (370aa)
Cytochrome c class I n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K9_LEPCP
cytochrome c class I Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cytochrome c class I
cn_combo_scaffold_984_20
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14524..15909)
DNA (1386bp) protein (462aa)
Oxidoreductase molybdopterin binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6L0_LEPCP
molybdopterin-binding oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
molybdopterin-binding oxidoreductase
cn_combo_scaffold_984_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16309..17697
DNA (1389bp) protein (463aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:BAL94700.1}; EC=3.6.4.13 {ECO:0000313|EMBL:BAL94700.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubriviv
ATP-dependent RNA helicase RhlE n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW3_RUBGI
cn_combo_scaffold_984_22
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17714..18070)
DNA (357bp) protein (119aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Cupriavidus sp. WS RepID=UPI00038070B1
cn_combo_scaffold_984_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18145..19260)
DNA (1116bp) protein (372aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Molybdenum ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAB2_9BURK
molybdenum ABC transporter ATP-binding protein
cn_combo_scaffold_984_24
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19257..19940)
DNA (684bp) protein (228aa)
Molybdate ABC transporter inner membrane subunit n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YV11_9RHOO
Molybdate ABC transporter inner membrane subunit {ECO:0000313|EMBL:ENO85973.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="T
molybdate ABC transporter inner membrane subunit
cn_combo_scaffold_984_25
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19976..20758)
DNA (783bp) protein (261aa)
Candidate ABC type molybdate transport system, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3E5_RAMTT
molybdate ABC transporter periplasmic protein
Candidate ABC type molybdate transport system, periplasmic component {ECO:0000313|EMBL:AEG92419.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
cn_combo_scaffold_984_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20851..21615
DNA (765bp) protein (255aa)
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3E6_RAMTT
LysR family transcriptional regulator; K02019 molybdate transport system regulatory protein Tax=GWA2_Curvibacter_64_110_curated
LysR family transcriptional regulator
cn_combo_scaffold_984_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21636..22535)
DNA (900bp) protein (300aa)
gluQ; glutamyl-Q tRNA(Asp) synthetase GluQ (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW5_RUBGI
cn_combo_scaffold_984_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22532..23524)
DNA (993bp) protein (331aa)
LysR family transcriptional regulator n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034824B8
LysR family transcriptional regulator {ECO:0000313|EMBL:EGJ09761.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic
LysR family transcriptional regulator
cn_combo_scaffold_984_29
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23657..24379
DNA (723bp) protein (241aa)
Putative pirin-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN44_9BURK
transcription cofactor, metal binding pirin domain; K06911 Tax=RBG_16_Betaproteobacteria_66_20_curated
pirin-like protein
Displaying items 1-30 of 53 in total

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