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cn_combo_scaffold_76_68

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 74867..76225

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 448.0
  • Bit_score: 717
  • Evalue 9.90e-204
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 452.0
  • Bit_score: 714
  • Evalue 1.70e-203
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQG1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 448.0
  • Bit_score: 717
  • Evalue 7.10e-204

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGACAGCGCAAGAGGAATGGCTCGAGGTCGAATCGCTGGACCTCGATGCGCAGGGCGTGGCGCATCGCGCCGACGGCAAGGTGGTCTTCATCGAGGGCGCGCTGCCTGGCGAGCGCGTGCAGGCGGCGGTGGCGCGCCGCAAGAACCACTGGGAACAGGCGCAGCTCGCGGCGCTCGCGCGCGAGAGCGCGCAGCGCGTGCGCCCGGCGTGCGCGCACTTCGGCCTGCACGCCGGCGCCTGCGGCGGCTGCAAGATGCAGCACCTGCACCTGTCGGCGCAGGTCGCCATCAAGCAGCGCGTGCTGGAGGACAACCTGCTGCATCTGGCGAAGGTGCAGCCGCAGCAACTGCTGCGCGCGATCGAGGGCCCGGCCTGGGGCTACCGCTGGCGGGCCCGCCTGTCCGTGCGCCACGTGCAGAAGAAGGGCACGGTGCTGGTTGGCTTTCACGAGCGCAAGTCGCGCTACGTGGCCGACATGCGCGAGTGCCGGGTGCTGCCGCCGGCGGTGAGCGCGCTGCTGCTGCCGCTGCGCGAACTGGTCGGCGCCCTCGAGCAGCGCGACCGCGTGCCGCAGCTCGAGCTCGCGGTCGGCGACGAGGTCACGGCGTTGGTGCTGCGCCATCTGCAGCCGCTGACGGTGGCCGACGCCGCGCGCCTGCGCGCGTTCGCGGCCGAGCACGGCGTGCAGTGGTGGCTGCAGGCCAAGGGTCCGGAGACCGTGCAGCGCCTGGACGAAGGCGGCCCCGAACTGGCCTATGCGCTGCCCGAGTTCGGCGTCGTGATGCCCTTCAAGCCGACCGACTTCACACAGGTCAACCCGCACATCAACCGCGTGCTGGTGGGCCGCGCGATCGGCCTGCTCGATCCGCAGCCGCACGAGCGCGTCGTGGACTGGTTCTGTGGCCTGGGCAACTTCACGCTGCCGCTGGCCACGCGCGCGCAACGGGTGCATGGCCTCGAGGGCAGCGCGGTGCTGGTGCAGCGCGCCGGCGAGAACGCGCGCCGCAACGGCCTGGCGCAGCGGGCGAGCTTCGAGGCGCGTGACCTGCTCGAGATCGGCGCCGCCGACGTCGTGGCCACCGGGGCGGCCGAACGCTGGCTCGTCGACCCGCCGCGCGAGGGGGCGTTCGCACTCGCCAAGGCGCTGGCCGACCTGCACGCGTCCCCCGCGGACGGCTGGCAGCCACCGCGACGCGTCGTCTACGTCAGCTGCAACCCGGCCACGCTCGCGCGCGACGCCGGGCTGCTCGTGCACCAGGCGGGCTACCGCTGCAGTGGCGCGGGCGTGGTCAACATGTTCCCCCACACGGCCCACGTCGAGAGCATCGCGGTCTTCGATCGCGACGCCTCGACCTAG
PROTEIN sequence
Length: 453
MTAQEEWLEVESLDLDAQGVAHRADGKVVFIEGALPGERVQAAVARRKNHWEQAQLAALARESAQRVRPACAHFGLHAGACGGCKMQHLHLSAQVAIKQRVLEDNLLHLAKVQPQQLLRAIEGPAWGYRWRARLSVRHVQKKGTVLVGFHERKSRYVADMRECRVLPPAVSALLLPLRELVGALEQRDRVPQLELAVGDEVTALVLRHLQPLTVADAARLRAFAAEHGVQWWLQAKGPETVQRLDEGGPELAYALPEFGVVMPFKPTDFTQVNPHINRVLVGRAIGLLDPQPHERVVDWFCGLGNFTLPLATRAQRVHGLEGSAVLVQRAGENARRNGLAQRASFEARDLLEIGAADVVATGAAERWLVDPPREGAFALAKALADLHASPADGWQPPRRVVYVSCNPATLARDAGLLVHQAGYRCSGAGVVNMFPHTAHVESIAVFDRDAST*