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cn_combo_scaffold_76_75

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 83816..84292

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUI0_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 158.0
  • Bit_score: 264
  • Evalue 9.80e-68
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 158.0
  • Bit_score: 264
  • Evalue 2.80e-68
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=983917 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 158.0
  • Bit_score: 264
  • Evalue 1.40e-67

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCCACCATTCCCCTGACCCTCCGCGGCGCCGAGCAGCTCAAGGCCGAACTGCATCGTCTGAAGACCGTCGAGCGCCACGCCGCGATCCAGGCCATCGCCGAGGCGCGCGCGCAGGGCGACCTCTCCGAGAACGCCGAGTACGACGCCGCCAAGGACCGGCAGGGTTTCGTCGAGGGGCGCATCAAGGAACTCGAGGCCAAGCTCGCCGCGGCGCAGGTGATCGACCCGGCCGCGGTGAATGCCGGCGGCAGGGTGGTGTTCGGCGCCACCGTCGACCTCGAGGACGAGGACAGCGGGCAGAAGGTCACCTACCAGATCGTCGGCGACGACGAGGCCGACCTGAAGCTCGGCCTGATCTCGATCAGCAGCCCGATCGCGCGCGCCCTCATCGGCAAGGTCGCGGGCGACGTCGCCGAGGTGCAGGCTCCGGGCGGCCTGCACCACTGGGAAATCATGGACGTGCGCTACGTCTGA
PROTEIN sequence
Length: 159
MATIPLTLRGAEQLKAELHRLKTVERHAAIQAIAEARAQGDLSENAEYDAAKDRQGFVEGRIKELEAKLAAAQVIDPAAVNAGGRVVFGATVDLEDEDSGQKVTYQIVGDDEADLKLGLISISSPIARALIGKVAGDVAEVQAPGGLHHWEIMDVRYV*