ggKbase home page

cn_combo_scaffold_984_46

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(41462..42100)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein Cas4 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4I5_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 1.50e-87
CRISPR-associated Cas4 family protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 4.20e-88
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ACB33424.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain AT similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 330
  • Evalue 2.10e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGGACGACGCCGACCCCCTGCCCCTGTCGGCCCTGCAGCACTGGGCGTATTGCCCGCGCCAGTGCGGCCTGATCCACCTGGAACAGGCCTTCGACGACAACCTGCATACCCTGCGCGGCAACGCCGTGCATGCACAGGTGGACCGTCCGGGTTTCGAGGTCCGCCGCGGCCTGCGTGTCGAACGCGCCCTGCCGCTGTTCAGCGACCGCCTGGGCCTGGTCGGCAAGGCCGATACGGTGGAGTTCGAGCCCGACGGCACGCCCTACCCGGTGGAATACAAGCACGGCAGCCGCCACAAGGCCGCCGACATCGCCGCCTGCGACGACCTGCAACTGGCTGCACAGGCCTTGTGCCTGCAGGAAATGACCGGCCACCCGGTCAACGAGGGGGCCTTGTTCTATGCCAGCTCCAAGCGGCGGCGGGTGGTGCAGATCGACGACGCGCTGCGAACCCTGGTGGCCGAGACCGCCGCCGCGGCACGCGCCATGCTGGCAGCCGGCCATCTGCCCCCGCCCACCGCCGACATGCGGCGTTGTCACGGCTGCTCGCTGCGCGACCGCTGTCAACCCGAGGCGCTGGCCAGACTGAGCGCGAGCAGCGATGCCGACTTGTTCGACCCCCATGACGACCTGGCCTGA
PROTEIN sequence
Length: 213
MDDADPLPLSALQHWAYCPRQCGLIHLEQAFDDNLHTLRGNAVHAQVDRPGFEVRRGLRVERALPLFSDRLGLVGKADTVEFEPDGTPYPVEYKHGSRHKAADIAACDDLQLAAQALCLQEMTGHPVNEGALFYASSKRRRVVQIDDALRTLVAETAAAARAMLAAGHLPPPTADMRRCHGCSLRDRCQPEALARLSASSDADLFDPHDDLA*