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scnpilot_p_inoc_scaffold_8308

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_8308_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..560
DNA (558bp) protein (186aa)
Tn21 integrase IntI1 n=1 Tax=Shigella flexneri 2a RepID=Q93F31_SHIFL rbh
integrase
Integron integrase family protein {ECO:0000313|EMBL:KEJ67518.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
scnpilot_p_inoc_scaffold_8308_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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776..1345
DNA (570bp) protein (190aa)
Resolvase domain protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KBY7_METEX
Site-specific recombinase {ECO:0000313|EMBL:EYR79530.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transposon gamma-delta resolvase
scnpilot_p_inoc_scaffold_8308_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1360..1707
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B33892
Uncharacterized protein {ECO:0000313|EMBL:EYR79531.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_8308_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1709..1936
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWL2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EYR79532.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_8308_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2129..2461
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGZ9_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EYR79533.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_8308_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2595..3236
DNA (642bp) protein (214aa)
Partition protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NDW0_RHOPA
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:EYR79534.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella
parA; partition protein
scnpilot_p_inoc_scaffold_8308_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3233..3517
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR79535.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_p_inoc_scaffold_8308_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3579..4694
DNA (1116bp) protein (372aa)
Plasmid encoded RepA protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I760_RHOVT rbh
Plasmid partitioning protein RepA {ECO:0000313|EMBL:EYR79536.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.
plasmid encoded RepA protein
Displaying 8 items

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