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scnpilot_p_inoc_scaffold_1212

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1212_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PGP8_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07863.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
scnpilot_p_inoc_scaffold_1212_2
unknown

Not on your lists

comp(420..1133)
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1212_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1570..2811
DNA (1242bp) protein (414aa)
Rhs protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2J0_RAMTT
Rhs protein
Rhs protein-like protein {ECO:0000313|EMBL:AEG92353.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouin
scnpilot_p_inoc_scaffold_1212_4
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2855..3322
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QD2_RHOFD
type II restriction enzyme, methylase subunits
Type II restriction enzyme, methylase subunits {ECO:0000313|EMBL:BAO80956.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonada
scnpilot_p_inoc_scaffold_1212_5
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3371..5053
DNA (1683bp) protein (561aa)
Capsule biosynthesis enzyme-like uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39CJ4_BURS3
hypothetical protein
Capsule biosynthesis enzyme-like uncharacterized protein {ECO:0000313|EMBL:ABB09822.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholde
scnpilot_p_inoc_scaffold_1212_6
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5116..5751)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQF7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET95572.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
scnpilot_p_inoc_scaffold_1212_7
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5748..6152)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQF7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET95572.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
scnpilot_p_inoc_scaffold_1212_8
unknown

Not on your lists

6359..6502
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1212_9
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6475..6846)
DNA (372bp) protein (124aa)
Restriction endonuclease n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K2U8_CYAP8
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ACK67649.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Syne
scnpilot_p_inoc_scaffold_1212_10
unknown

Not on your lists

7078..7197
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1212_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7187..8137
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9W9_9PROT
Helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:BAO29683.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" so
scnpilot_p_inoc_scaffold_1212_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8677..10311
DNA (1635bp) protein (545aa)
DNA-cytosine methyltransferase {ECO:0000313|EMBL:EZP56620.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EZP56620.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
putative DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Putative DNA (Cytosine-5-)-methyltransferase n=1 Tax=Ralstonia solanacearum RepID=D8NSK4_RALSL
scnpilot_p_inoc_scaffold_1212_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10373..12943
DNA (2571bp) protein (857aa)
RNA polymerase sigma factor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TX3_RHOFD rbh
sigma 28 rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferri
scnpilot_p_inoc_scaffold_1212_14
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12976..14433
DNA (1458bp) protein (486aa)
Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K0Z3_BURCC rbh
putative uncharacterized protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG84863.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
scnpilot_p_inoc_scaffold_1212_15
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14430..17348
DNA (2919bp) protein (973aa)
Endonuclease n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HN47_PSEST rbh
Endonuclease {ECO:0000313|EMBL:KGM39022.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
endonuclease rbh
scnpilot_p_inoc_scaffold_1212_16
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17332..18348
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8J8_ACIAP rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM39023.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1212_17
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18345..20117
DNA (1773bp) protein (591aa)
Abortive phage infection protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8J9_ACIAP rbh
Abortive phage infection protein {ECO:0000313|EMBL:KGM39024.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
putative uncharacterized protein
scnpilot_p_inoc_scaffold_1212_18
unknown

Not on your lists

comp(20138..20362)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1212_19
unknown

Not on your lists

comp(20328..20813)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1212_20
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20875..21270
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGY0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:EWS61727.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1212_21
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21267..21647
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036E8EE2
hypothetical protein Tax=GWA2_Gallionellales_54_124_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1212_22
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21647..23389
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037B9FF0 rbh
resolvase Tax=GWA2_Gallionellales_54_124_curated
resolvase
scnpilot_p_inoc_scaffold_1212_23
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23445..24206
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF5_THIA3 rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1212_24
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24477..24986)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J2T8N1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM76091.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
Displaying 24 items

View Taxonomy