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scnpilot_p_inoc_scaffold_47

Search features with annotation key words

Displaying items 331-360 of 426 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_47_331
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331602..332630
DNA (1029bp) protein (343aa)
diguanylate cyclase; K13590 diguanylate cyclase id=12496349 bin=THIO_MID species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHR73715.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bact
diguanylate cyclase
scnpilot_p_inoc_scaffold_47_332
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332768..334594
DNA (1827bp) protein (609aa)
hypothetical protein id=12496348 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_333
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334682..335737
DNA (1056bp) protein (352aa)
hypothetical protein id=12496347 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_334
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335806..341622)
DNA (5817bp) protein (1939aa)
signal transduction histidine kinase CheA-like protein; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) id=12496346 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CheA Signal Transduction Histidine Kinases (STHK) {ECO:0000313|EMBL:AAZ98501.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
signal transduction histidine kinase CheA-like protein
scnpilot_p_inoc_scaffold_47_335
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341668..343770)
DNA (2103bp) protein (701aa)
chemotaxis sensory transducer; K02660 twitching motility protein PilJ id=12496345 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ98502.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_47_336
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(343834..344355)
DNA (522bp) protein (174aa)
CheW protein; K02659 twitching motility protein PilI id=12496344 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CheW protein; K02659 twitching motility protein PilI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
chemotaxis protein CheW
scnpilot_p_inoc_scaffold_47_337
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(344366..344731)
DNA (366bp) protein (122aa)
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH id=12496343 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
scnpilot_p_inoc_scaffold_47_338
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(344766..345158)
DNA (393bp) protein (131aa)
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG id=12496342 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG Tax=GWE1_Thiobacillus_62_9_curated
response regulator receiver domain-containing protein
scnpilot_p_inoc_scaffold_47_339
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345314..346219)
DNA (906bp) protein (302aa)
hypothetical protein id=12496341 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_340
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346386..346568)
DNA (183bp) protein (61aa)
rubredoxin protein id=12496340 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rubredoxin protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
rubredoxin protein
scnpilot_p_inoc_scaffold_47_341
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

346622..347464
DNA (843bp) protein (281aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] id=12496339 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWE1_Thiobacillus_62_9_curated
phosphomethylpyrimidine kinase
scnpilot_p_inoc_scaffold_47_342
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

347461..348105
DNA (645bp) protein (215aa)
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=12496338 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiamine monophosphate synthase (EC:2.5.1.3)
scnpilot_p_inoc_scaffold_47_343
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

348112..349389
DNA (1278bp) protein (426aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=12496337 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
scnpilot_p_inoc_scaffold_47_344
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

349430..350497
DNA (1068bp) protein (356aa)
hypothetical protein id=12496336 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_345
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350575..352863)
DNA (2289bp) protein (763aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] id=12496335 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiol:disulfide interchange protein DsbD (EC:1.8.1.8)
scnpilot_p_inoc_scaffold_47_346
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(352856..353179)
DNA (324bp) protein (108aa)
divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein id=12496334 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
divalent cation tolerance protein
Divalent cation tolerance protein {ECO:0000313|EMBL:AAZ98513.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
scnpilot_p_inoc_scaffold_47_347
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

353183..353590
DNA (408bp) protein (136aa)
FxsA protein; K07113 UPF0716 protein FxsA id=12496333 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
FxsA protein; K07113 UPF0716 protein FxsA Tax=GWE1_Thiobacillus_62_9_curated
FxsA protein
scnpilot_p_inoc_scaffold_47_348
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(353627..354559)
DNA (933bp) protein (311aa)
putative oxidoreductase protein id=12496332 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative oxidoreductase protein Tax=GWE1_Thiobacillus_62_9_curated
oxidoreductase
scnpilot_p_inoc_scaffold_47_349
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354659..355696
DNA (1038bp) protein (346aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] id=12496331 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CDP-6-deoxy-delta-3,4-glucoseen reductase; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=GWE1_Thiobacillus_62_9_curated
CDP-6-deoxy-delta-3,4-glucoseen reductase
scnpilot_p_inoc_scaffold_47_350
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355743..356075)
DNA (333bp) protein (111aa)
HxlR family transcriptional regulator id=12496330 bin=THIO_MID species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=THIO_MID organism_group=Betaproteobacteria
transcriptional regulator Tax=CG_Rhodocyc_01
HxlR family transcriptional regulator
scnpilot_p_inoc_scaffold_47_351
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356182..356658
DNA (477bp) protein (159aa)
ccp; cytochrome c' id=12496329 bin=THIO_MID species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Cytochrome c' Tax=CG_Rhodocyc_01
cytochrome c'
scnpilot_p_inoc_scaffold_47_352
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356692..357201)
DNA (510bp) protein (170aa)
hypothetical protein id=12496328 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_353
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357307..358479)
DNA (1173bp) protein (391aa)
putative porphyrin biosynthesis protein; K02498 HemY protein id=12496327 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative porphyrin biosynthesis protein; K02498 HemY protein Tax=GWE1_Thiobacillus_62_9_curated
porphyrin biosynthesis protein
scnpilot_p_inoc_scaffold_47_354
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(358479..359504)
DNA (1026bp) protein (342aa)
uroporphyrin-III C-methyltransferase; K02496 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] id=12496326 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AAZ98519.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
scnpilot_p_inoc_scaffold_47_355
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359501..360265)
DNA (765bp) protein (255aa)
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] id=12496325 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
uroporphyrinogen-III synthase (EC:4.2.1.75)
scnpilot_p_inoc_scaffold_47_356
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360356..361270)
DNA (915bp) protein (305aa)
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] id=12496324 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
porphobilinogen deaminase (EC:2.5.1.61)
scnpilot_p_inoc_scaffold_47_357
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361378..361860
DNA (483bp) protein (161aa)
hypothetical protein id=12496323 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98522.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_47_358
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361916..362551
DNA (636bp) protein (212aa)
two component LuxR family transcriptional regulator id=12496322 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
two component LuxR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_47_359
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

362561..364462
DNA (1902bp) protein (634aa)
periplasmic sensor hybrid histidine kinase id=12496321 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
periplasmic sensor hybrid histidine kinase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
periplasmic sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_47_360
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364497..365894
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=12496320 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=RIFOXYD1_FULL_Hydrogenop
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
Displaying items 331-360 of 426 in total

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