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scnpilot_p_inoc_scaffold_47

Search features with annotation key words

Displaying items 391-420 of 426 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_47_391
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(396677..397882)
DNA (1206bp) protein (402aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5 4.1.1.36); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] id=12496290 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
DNA/pantothenate metabolism flavoprotein {ECO:0000313|EMBL:AAZ98540.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
scnpilot_p_inoc_scaffold_47_392
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

397917..398591
DNA (675bp) protein (225aa)
DNA repair protein RadC; K03630 DNA repair protein RadC id=12496289 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA repair protein RadC
scnpilot_p_inoc_scaffold_47_393
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


398713..398949
DNA (237bp) protein (79aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12496288 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWE1_Thiobacillus_62_9_curated
rpmB; 50S ribosomal protein L28
scnpilot_p_inoc_scaffold_47_394
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


398965..399132
DNA (168bp) protein (56aa)
50S ribosomal protein L33
50S ribosomal protein L33P; K02913 large subunit ribosomal protein L33 id=12496287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
50S ribosomal protein L33P; K02913 large subunit ribosomal protein L33 Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_47_395
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(399228..400403)
DNA (1176bp) protein (392aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] id=12496286 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
fatty acid desaturase
scnpilot_p_inoc_scaffold_47_396
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(400461..401759)
DNA (1299bp) protein (433aa)
hypothetical protein id=12496285 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_397
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(401770..402987)
DNA (1218bp) protein (406aa)
long chain fatty acid transport protein; K06076 long-chain fatty acid transport protein id=12496284 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
long chain fatty acid transport protein; K06076 long-chain fatty acid transport protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
long chain fatty acid transport protein
scnpilot_p_inoc_scaffold_47_398
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(403015..404832)
DNA (1818bp) protein (606aa)
long-chain fatty-acid-CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=12496283 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
long-chain fatty-acid-CoA ligase
Long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:AAZ98550.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiob
scnpilot_p_inoc_scaffold_47_399
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404891..406138)
DNA (1248bp) protein (416aa)
putative tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] id=12496282 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=GWE1_Thiobacillus_62_9_curated
tRNA and rRNA cytosine-C5-methylase
scnpilot_p_inoc_scaffold_47_400
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(406225..407280)
DNA (1056bp) protein (352aa)
hypothetical protein id=12496281 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_401
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(407319..408278)
DNA (960bp) protein (320aa)
hypothetical protein id=12496280 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_402
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(408295..409173)
DNA (879bp) protein (293aa)
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] id=12496279 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
heat shock protein HtpX
scnpilot_p_inoc_scaffold_47_403
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

409296..410198
DNA (903bp) protein (301aa)
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA id=12496278 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_47_404
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410199..410621)
DNA (423bp) protein (141aa)
hypothetical protein id=12496277 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_405
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410614..410982)
DNA (369bp) protein (123aa)
putative thioredoxin-like protein id=12496276 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative thioredoxin-like protein Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin-like protein
scnpilot_p_inoc_scaffold_47_406
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411113..412927)
DNA (1815bp) protein (605aa)
sulfate anion transporter id=12496275 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
sulfate anion transporter
Sulphate anion transporter {ECO:0000313|EMBL:AAZ98562.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;"
scnpilot_p_inoc_scaffold_47_407
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(413006..414274)
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales
periplasmic sensor signal transduction histidine kinase id=12496274 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_47_408
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(414264..414965)
DNA (702bp) protein (234aa)
two component transcriptional regulator id=12496273 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
two component transcriptional regulator
Two component Transcriptional regulator, Winged helix family {ECO:0000313|EMBL:AAZ98564.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy
scnpilot_p_inoc_scaffold_47_409
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(415069..416484)
DNA (1416bp) protein (472aa)
Fis family transcriptional regulator id=12496272 bin=THIO_MID species=Thioalkalivibrio sp. ALE12 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Fis family transcriptional regulator Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_47_410
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416427..417977)
DNA (1551bp) protein (517aa)
integral membrane sensor signal transduction histidine kinase id=12496271 bin=THIO_MID species=Thioalkalivibrio sp. AKL11 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
integral membrane sensor signal transduction histidine kinase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_47_411
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418088..418663
DNA (576bp) protein (192aa)
id=12496270 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria rbh
id=12496270 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_47_412
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418709..420784
DNA (2076bp) protein (692aa)
sulfate transporter id=12496269 bin=THIO_MID species=Thioalkalivibrio sp. HL-Eb18 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
sulfate transporter
Sulphate transporter {ECO:0000313|EMBL:ADC71500.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivib
scnpilot_p_inoc_scaffold_47_413
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(420846..421145)
DNA (300bp) protein (100aa)
hypothetical protein id=12496268 bin=THIO_MID species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ86908.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
scnpilot_p_inoc_scaffold_47_414
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421150..421974)
DNA (825bp) protein (275aa)
putative Trypsin-like serine protease id=12496267 bin=THIO_MID species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative Trypsin-like serine protease
Putative Trypsin-like serine protease {ECO:0000313|EMBL:CAZ86907.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans
scnpilot_p_inoc_scaffold_47_415
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421977..424106)
DNA (2130bp) protein (710aa)
sulfate transporter id=12496266 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Sulfate transporter {ECO:0000313|EMBL:GAO37669.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.
sulfate transporter
scnpilot_p_inoc_scaffold_47_416
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

424207..425352
DNA (1146bp) protein (382aa)
hypothetical protein id=12496265 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EGV50273.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (ve
hypothetical protein
scnpilot_p_inoc_scaffold_47_417
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425379..425552)
DNA (174bp) protein (58aa)
CopG family transcriptional regulator id=12496264 bin=THIO_MID species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative ribbon-helix-helix protein, CobG family Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
putative CopG family protein
scnpilot_p_inoc_scaffold_47_418
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

425664..427292
DNA (1629bp) protein (543aa)
Sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulfate transporter; K03321 sulfate permease, SulP family id=12496263 bin=THIO_MID species=Pseudomonas nitroreducens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulfate transporter
Sulfate transporter/antisigma-factor antagonist STAS:Xanthine/uracil/vitamin C permease:Sulphate transporter {ECO:0000313|EMBL:AAZ64330.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteoba
scnpilot_p_inoc_scaffold_47_419
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427307..427942)
DNA (636bp) protein (212aa)
hypothetical protein id=12496262 bin=THIO_MID species=Nitrobacter sp. Nb-311A genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ35863.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_p_inoc_scaffold_47_420
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428014..430368)
DNA (2355bp) protein (785aa)
von Willebrand factor type A id=12496261 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
von Willebrand factor type A {ECO:0000313|EMBL:ADG29542.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (
Displaying items 391-420 of 426 in total

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