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scnpilot_p_inoc_scaffold_209

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Displaying items 1-30 of 158 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_209_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

438..1625
DNA (1188bp) protein (396aa)
iron-containing alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] id=12497825 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
iron-containing alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] Tax=GWE1_Thiobacillus_62_9_curated
iron-containing alcohol dehydrogenase
scnpilot_p_inoc_scaffold_209_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1688..2260
DNA (573bp) protein (191aa)
LemA family id=12497826 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
LemA family Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
LemA family
scnpilot_p_inoc_scaffold_209_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..3165
DNA (906bp) protein (302aa)
hypothetical protein id=12497827 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3242..3517
DNA (276bp) protein (92aa)
hypothetical protein id=12497828 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3518..3928)
DNA (411bp) protein (137aa)
hypothetical protein id=12497829 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3928..5388)
DNA (1461bp) protein (487aa)
putative flavodoxin oxidoreductase id=12497830 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flavodoxin oxidoreductase
Putative flavodoxin oxidoreductase {ECO:0000313|EMBL:AAZ97723.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thi
scnpilot_p_inoc_scaffold_209_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..7171
DNA (1722bp) protein (574aa)
exonuclease RecJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=12497831 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
exonuclease RecJ (EC:3.1.-.-)
RecJ exonuclease {ECO:0000313|EMBL:AAZ97724.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrif
scnpilot_p_inoc_scaffold_209_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7299..7895
DNA (597bp) protein (199aa)
hypothetical protein id=12497832 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7912..8925)
DNA (1014bp) protein (338aa)
UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=12497833 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
UDP-galactose 4-epimerase (EC:5.1.3.2)
scnpilot_p_inoc_scaffold_209_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8945..9844)
DNA (900bp) protein (300aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=12497834 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
scnpilot_p_inoc_scaffold_209_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9841..10383)
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] id=12497835 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
scnpilot_p_inoc_scaffold_209_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10439..11320)
DNA (882bp) protein (294aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=12497836 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
scnpilot_p_inoc_scaffold_209_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11320..12384)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=12497837 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydro
scnpilot_p_inoc_scaffold_209_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12381..12722)
DNA (342bp) protein (114aa)
VanZ family protein id=12497838 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
VanZ-like protein Tax=CG_Rhodocyc_01
VanZ family protein
scnpilot_p_inoc_scaffold_209_15
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12724..13497)
DNA (774bp) protein (258aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] id=12497839 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EGV27652.1}; EC=2.4.1.187 {ECO:0000313|EMBL:EGV27652.1};; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiale
UDP-N-acetyl-D-mannosaminuronic acid transferase (EC:2.4.1.187)
scnpilot_p_inoc_scaffold_209_16
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13494..14651)
DNA (1158bp) protein (386aa)
transferase id=12497840 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Glycosyltransferase
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24181.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_209_17
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14648..15781)
DNA (1134bp) protein (378aa)
group 1 glycosyl transferase id=12497841 bin=THIO_MID species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGV27654.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_209_18
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15878..17116)
DNA (1239bp) protein (413aa)
beta-1,4-xylanase id=12497842 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
beta-1,4-xylanase
Beta-1,4-xylanase {ECO:0000313|EMBL:AFY82267.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata
scnpilot_p_inoc_scaffold_209_19
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17214..18173)
DNA (960bp) protein (320aa)
family 2 glycosyl transferase id=12497843 bin=THIO_MID species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=THIO_MID organism_group=Betaproteobacteria rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EST53176.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_209_20
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18260..19597)
DNA (1338bp) protein (446aa)
lipid A core-O-antigen ligase-like enyme id=12497844 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
lipid A core-O-antigen ligase-like enyme
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGL03932.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomacu
scnpilot_p_inoc_scaffold_209_21
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19585..20925)
DNA (1341bp) protein (447aa)
hypothetical protein
hypothetical protein id=12497845 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL84238.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
scnpilot_p_inoc_scaffold_209_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20929..21906)
DNA (978bp) protein (326aa)
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] id=12497846 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=GWE1_Thiobacillus_62_9_curated
GDP-L-fucose synthetase
scnpilot_p_inoc_scaffold_209_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21911..22996)
DNA (1086bp) protein (362aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=292415 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003744ED4 rbh
GDP-mannose 4,6-dehydratase
scnpilot_p_inoc_scaffold_209_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23028..23723)
DNA (696bp) protein (232aa)
hypothetical protein id=12497848 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23720..24619)
DNA (900bp) protein (300aa)
hypothetical protein id=12497849 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ97745.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillu
scnpilot_p_inoc_scaffold_209_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24624..25511)
DNA (888bp) protein (296aa)
hypothetical protein id=12497850 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25538..26926)
DNA (1389bp) protein (463aa)
chain length determinant protein id=12497851 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
chain length determinant protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
chain length determinant protein
scnpilot_p_inoc_scaffold_209_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26939..27736)
DNA (798bp) protein (266aa)
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein id=12497852 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein Tax=GWE1_Thiobacillus_62_9_curated
polysaccharide export outer membrane protein
scnpilot_p_inoc_scaffold_209_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27878..29116)
DNA (1239bp) protein (413aa)
hypothetical protein id=12497853 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_209_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29113..29772)
DNA (660bp) protein (220aa)
CAAX amino terminal protease family protein; K07052 id=12497854 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CAAX amino terminal protease family protein; K07052 Tax=GWE1_Thiobacillus_62_9_curated
CAAX amino terminal protease
Displaying items 1-30 of 158 in total

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