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scnpilot_p_inoc_scaffold_215

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Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_215_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..774
DNA (774bp) protein (258aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00035C5B74
scnpilot_p_inoc_scaffold_215_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

805..1677
DNA (873bp) protein (291aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] id=12496112 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=2924
scnpilot_p_inoc_scaffold_215_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1709..3088
DNA (1380bp) protein (460aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] id=12496113 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
scnpilot_p_inoc_scaffold_215_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3196..3618
DNA (423bp) protein (141aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] id=12496114 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=GWE1_Thiobacillus_62_9_curated
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
scnpilot_p_inoc_scaffold_215_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3751..5127
DNA (1377bp) protein (459aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=12496115 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
scnpilot_p_inoc_scaffold_215_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5131..6960
DNA (1830bp) protein (610aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=12496116 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
scnpilot_p_inoc_scaffold_215_7
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7006..8217)
DNA (1212bp) protein (404aa)
methionine gamma-lyase (EC:4.4.1.11) id=12496117 bin=THIO_MID species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Methionine gamma-lyase {ECO:0000313|EMBL:EGV32365.1}; EC=4.4.1.11 {ECO:0000313|EMBL:EGV32365.1};; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thio
Methionine gamma-lyase (EC:4.4.1.11)
scnpilot_p_inoc_scaffold_215_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..8801
DNA (456bp) protein (152aa)
AsnC family transcriptional regulator id=12496118 bin=THIO_MID species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
asnC family protein
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABE33986.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_p_inoc_scaffold_215_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8815..9447)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator id=12496119 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
two component LuxR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_215_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9481..10062)
DNA (582bp) protein (194aa)
short chain dehydrogenase; K00540 [EC:1.-.-.-] id=12496120 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
short chain dehydrogenase; K00540 [EC:1.-.-.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
short chain dehydrogenase
scnpilot_p_inoc_scaffold_215_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10263..10913)
DNA (651bp) protein (217aa)
thiol:disulfide interchange protein DsbA; K03673 thiol:disulfide interchange protein DsbA id=12496121 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thiol:disulfide interchange protein DsbA; K03673 thiol:disulfide interchange protein DsbA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiol:disulfide interchange protein DsbA
scnpilot_p_inoc_scaffold_215_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10913..11452)
DNA (540bp) protein (180aa)
putative FtsN cell division protein id=12496122 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative FtsN cell division protein Tax=GWE1_Thiobacillus_62_9_curated
FtsN cell division protein
scnpilot_p_inoc_scaffold_215_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11455..13128)
DNA (1674bp) protein (558aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=12496123 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
scnpilot_p_inoc_scaffold_215_14
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13284..13784)
DNA (501bp) protein (167aa)
id=12496124 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria rbh
id=12496124 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_215_15
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14033)
DNA (228bp) protein (76aa)
id=12496125 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12496125 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_215_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..16283)
DNA (2163bp) protein (721aa)
replication restart DNA helicase PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=12496126 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=292415 species="Bacteria; P
replication restart DNA helicase PriA
scnpilot_p_inoc_scaffold_215_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16623..17438)
DNA (816bp) protein (272aa)
hypothetical protein id=12496127 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98733.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_215_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17553..18629)
DNA (1077bp) protein (359aa)
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=12496128 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWE1_Thiobacillus_62_9_curated
uroporphyrinogen decarboxylase (EC:4.1.1.37)
scnpilot_p_inoc_scaffold_215_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18692..19264)
DNA (573bp) protein (191aa)
hypothetical protein id=12496129 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98731.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_215_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19351..19725)
DNA (375bp) protein (125aa)
hypothetical protein id=12496130 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_215_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19942..20307)
DNA (366bp) protein (122aa)
hypothetical protein id=12496131 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_215_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..20758)
DNA (345bp) protein (115aa)
transporter id=12496132 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transport-associated protein Tax=GWE1_Thiobacillus_62_9_curated
transporter
scnpilot_p_inoc_scaffold_215_23
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20733..20963)
DNA (231bp) protein (77aa)
id=12496133 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12496133 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_215_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21017..21496)
DNA (480bp) protein (160aa)
transport-associated id=12496134 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transport-associated
scnpilot_p_inoc_scaffold_215_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21493..21771)
DNA (279bp) protein (93aa)
hypothetical protein id=12496135 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_215_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22074..22241)
DNA (168bp) protein (56aa)
hypothetical protein id=12496136 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_215_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22323..23687)
DNA (1365bp) protein (455aa)
two component Fis family transcriptional regulator; K07715 two-component system, NtrC family, response regulator GlrR id=12496137 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
two component Fis family transcriptional regulator; K07715 two-component system, NtrC family, response regulator GlrR Tax=GWE1_Thiobacillus_62_9_curated
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_215_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23684..24181)
DNA (498bp) protein (166aa)
hypothetical protein id=12496138 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_215_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24181..25629)
DNA (1449bp) protein (483aa)
signal transduction histidine kinase (EC:2.7.3.-); K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] id=12496139 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
signal transduction histidine kinase (EC:2.7.3.-); K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
signal transduction histidine kinase (EC:2.7.3.-)
scnpilot_p_inoc_scaffold_215_30
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25706..26677)
DNA (972bp) protein (324aa)
FHA domain-containing protein id=12496140 bin=THIO_MID species=Comamonas sp. B-9 genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EWS55164.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
FHA domain-containing protein
Displaying items 1-30 of 146 in total

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