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scnpilot_p_inoc_scaffold_427

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Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_427_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(340..846)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA repair protein
scnpilot_p_inoc_scaffold_427_2
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1299..3062)
DNA (1764bp) protein (588aa)
DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=12498440 bin=THIO_MID species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleu
DNA helicase rbh
scnpilot_p_inoc_scaffold_427_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..4892)
DNA (1827bp) protein (609aa)
hypothetical protein; K07459 putative ATP-dependent endonuclease of the OLD family id=12498439 bin=THIO_MID species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09888.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
scnpilot_p_inoc_scaffold_427_4
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4933..5847)
DNA (915bp) protein (305aa)
hypothetical protein; K09144 hypothetical protein id=12498438 bin=THIO_MID species=Verminephrobacter aporrectodeae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EFF45029.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscan
hypothetical protein
scnpilot_p_inoc_scaffold_427_5

Not on your lists

comp(5844..6581)
DNA (738bp) protein (246aa)
hypothetical protein id=12495408 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH97481.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_427_6
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7074..7478
DNA (405bp) protein (135aa)
hypothetical protein id=12498436 bin=THIO_MID species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Globin, protozoan/cyanobacterial family {ECO:0000313|EMBL:KCB36638.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Borde
bacterial-like globin family protein
scnpilot_p_inoc_scaffold_427_7
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7471..8700
DNA (1230bp) protein (410aa)
NnrS family protein; K07234 uncharacterized protein involved in response to NO id=12498435 bin=THIO_MID species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
NnrS family protein
NnrS family protein {ECO:0000313|EMBL:ABI58893.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutroph
scnpilot_p_inoc_scaffold_427_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8714..9160
DNA (447bp) protein (149aa)
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor id=12498434 bin=THIO_MID species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Transcriptional regulator, BadM/Rrf2 family protein {ECO:0000313|EMBL:EIK88412.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;
BadM/Rrf2 family transcriptional regulator
scnpilot_p_inoc_scaffold_427_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9333..10994
DNA (1662bp) protein (554aa)
putative FAD-dependent dehydrogenase; K07137 id=12498433 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative FAD-dependent dehydrogenase; K07137 Tax=GWE1_Thiobacillus_62_9_curated
FAD-dependent dehydrogenase
scnpilot_p_inoc_scaffold_427_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10906..12231)
DNA (1326bp) protein (442aa)
sensor histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] id=12498432 bin=THIO_MID species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
envZ1; osmolarity sensor protein (EC:2.7.13.1); K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=CG_Rhodocyc_01
osmolarity sensor protein
scnpilot_p_inoc_scaffold_427_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12231..12941)
DNA (711bp) protein (237aa)
winged helix family two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR id=12498431 bin=THIO_MID species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ompR; osmolarity response regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR Tax=GWA2_Rhodocyclales_65_20_curated
ompR; osmolarity response regulator
scnpilot_p_inoc_scaffold_427_12
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13147..13581
DNA (435bp) protein (145aa)
signal transduction protein id=12498430 bin=THIO_MID species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Calcium-binding EF-hand {ECO:0000313|EMBL:EON13555.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.
Ca2+ sensor
scnpilot_p_inoc_scaffold_427_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13841..14200
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator id=12498429 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ArsR family transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transcriptional regulator, ArsR family
scnpilot_p_inoc_scaffold_427_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14197..14679
DNA (483bp) protein (161aa)
glyoxalase/bleomycin resistance protein/dioxygenase id=12498428 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_427_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14700..15128
DNA (429bp) protein (143aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] id=12498427 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_427_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15145..15642
DNA (498bp) protein (166aa)
arsC1; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protein tyrosine phosphatase id=12498426 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
low molecular weight phosphotyrosine phosphatase family protein
scnpilot_p_inoc_scaffold_427_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15671..16750
DNA (1080bp) protein (360aa)
ACR3 family arsenite transporter; K03325 arsenite transporter, ACR3 family id=12498425 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ACR3 family arsenite transporter
Putative arsenite transporter, ACR3 family {ECO:0000313|EMBL:AAZ97379.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_427_18
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16761..17693
DNA (933bp) protein (311aa)
beta-lactamase domain-containing protein id=12498424 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
beta-lactamase domain-containing protein Tax=GWF2_Sideroxydans_59_14_curated
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_427_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17786..18301)
DNA (516bp) protein (172aa)
electron transport protein SCO1/SenC; K07152 id=12498423 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
senC; SCO2-like protein RP587; K07152 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
electron transport protein SCO1/SenC
scnpilot_p_inoc_scaffold_427_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18610..20571
DNA (1962bp) protein (654aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family id=12498422 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
GAF modulated sigma54 specific transcriptional regulator, Fis family
scnpilot_p_inoc_scaffold_427_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20573..21073
DNA (501bp) protein (167aa)
pts; 6-pyruvoyl tetrahydropterin synthase id=12498421 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
pts; 6-pyruvoyl tetrahydropterin synthase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
pts; 6-pyruvoyl tetrahydropterin synthase
scnpilot_p_inoc_scaffold_427_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21066..21623
DNA (558bp) protein (186aa)
flavoprotein id=12498420 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flavoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flavoprotein
scnpilot_p_inoc_scaffold_427_23
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21599..23005
DNA (1407bp) protein (469aa)
dihydropteroate synthase DHPS id=12498419 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC15372.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
dihydropteroate synthase DHPS
scnpilot_p_inoc_scaffold_427_24
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23002..23574
DNA (573bp) protein (191aa)
hypothetical protein; K09154 hypothetical protein id=12498418 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI61664.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter b
scnpilot_p_inoc_scaffold_427_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23571..24266
DNA (696bp) protein (232aa)
hypothetical protein id=12498417 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS88939.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
scnpilot_p_inoc_scaffold_427_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24294..25673)
DNA (1380bp) protein (460aa)
PLP-dependent enzyme, glutamate decarboxylase id=12498416 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
PLP-dependent enzyme, glutamate decarboxylase
PLP-dependent enzyme, glutamate decarboxylase {ECO:0000313|EMBL:AGA24650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" sour
scnpilot_p_inoc_scaffold_427_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25670..26260)
DNA (591bp) protein (197aa)
thioredoxin family protein id=12498415 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thioredoxin family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin family protein
scnpilot_p_inoc_scaffold_427_28
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26318..26980)
DNA (663bp) protein (221aa)
aspartate/glutamate/uridylate kinase id=12498414 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:EGV33367.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorho
aspartate/glutamate/uridylate kinase
scnpilot_p_inoc_scaffold_427_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26965..28389)
DNA (1425bp) protein (475aa)
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] id=12498413 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-)
scnpilot_p_inoc_scaffold_427_30
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28386..29435)
DNA (1050bp) protein (350aa)
H4MPT-linked C1 transfer pathway protein id=12498412 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
H4MPT-linked C1 transfer pathway protein
H4MPT-linked C1 transfer pathway protein {ECO:0000313|EMBL:GAN50592.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sour
Displaying items 1-30 of 192 in total

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