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scnpilot_p_inoc_scaffold_649

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_649_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..473
DNA (471bp) protein (157aa)
Transposase Tn3 n=1 Tax=Thauera sp. 28 RepID=N6ZHF3_9RHOO
tnpA; transposase
Transposase {ECO:0000313|EMBL:AEJ04529.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain AT
scnpilot_p_inoc_scaffold_649_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

793..1713
DNA (921bp) protein (307aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC id=12497051 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=GWE1_Thiobacillus_62_9_curated
tyrosine recombinase XerC
scnpilot_p_inoc_scaffold_649_3
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1776..2108
DNA (333bp) protein (111aa)
membrane protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037678CB
hypothetical protein; K09771 hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
hypothetical protein
scnpilot_p_inoc_scaffold_649_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2217..2663
DNA (447bp) protein (149aa)
XRE family transcriptional regulator id=12497052 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
XRE family transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_649_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2794..3195
DNA (402bp) protein (134aa)
hypothetical protein id=12497053 bin=THIO_MID species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_p_inoc_scaffold_649_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3195..3902
DNA (708bp) protein (236aa)
hypothetical protein id=12497054 bin=THIO_MID species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_p_inoc_scaffold_649_7
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3945..4268
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV93956.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
scnpilot_p_inoc_scaffold_649_8
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4282..4545
DNA (264bp) protein (88aa)
transcriptional regulator/antitoxin, MazE; K07172 antitoxin id=12497055 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Antitoxin {ECO:0000313|EMBL:EYC52151.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara
transcriptional regulator/antitoxin, MazE
scnpilot_p_inoc_scaffold_649_9
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4708..4956
DNA (249bp) protein (83aa)
putative plasmid stability protein id=12497056 bin=THIO_MID species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid stabilization protein
Plasmid stabilization protein {ECO:0000313|EMBL:AIQ99561.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Plurali
scnpilot_p_inoc_scaffold_649_10
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4953..5372
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
putative nucleic acid-binding protein, contains PIN domain id=12497057 bin=THIO_MID species=Enterobacter mori genus=Enterobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PilT domain-containing protein
scnpilot_p_inoc_scaffold_649_11
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5393..5578
DNA (186bp) protein (62aa)
Uncharacterized protein id=12497058 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPZ14395.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_p_inoc_scaffold_649_12
unknown

Not on your lists

5998..6279
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_649_13
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6349..6615
DNA (267bp) protein (89aa)
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_649_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..9477)
DNA (2862bp) protein (954aa)
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG id=12497060 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_649_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9478..10941)
DNA (1464bp) protein (488aa)
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH id=12497061 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH Tax=GWE1_Thiobacillus_62_9_curated
conjugative transfer pilus assembly protein TraH
scnpilot_p_inoc_scaffold_649_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10956..11765)
DNA (810bp) protein (270aa)
hypothetical protein id=12497062 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_649_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11762..12178)
DNA (417bp) protein (139aa)
hypothetical protein id=12497063 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_649_18
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12175..13011)
DNA (837bp) protein (279aa)
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria rbh
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_649_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13008..14309)
DNA (1302bp) protein (434aa)
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN id=12497065 bin=THIO_MID species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conjugal transfer mating pair stabilization protein TraN
scnpilot_p_inoc_scaffold_649_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14306..15421)
DNA (1116bp) protein (372aa)
id=12497066 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_649_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15418..16107)
DNA (690bp) protein (230aa)
IncF plasmid conjugative transfer protein TrbC
hypothetical protein id=12497067 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_649_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16109..17122)
DNA (1014bp) protein (338aa)
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU id=12497068 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU Tax=GWE1_Thiobacillus_62_9_curated
IncF plasmid conjugative transfer pilus assembly protein TraU
scnpilot_p_inoc_scaffold_649_23
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17110..17829)
DNA (720bp) protein (240aa)
hypothetical protein id=12497069 bin=THIO_MID species=Edwardsiella ictaluri genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KHN64561.1}; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;
hypothetical protein
scnpilot_p_inoc_scaffold_649_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17848..18471)
DNA (624bp) protein (208aa)
type-F conjugative transfer system protein TraW; K12061 conjugal transfer pilus assembly protein TraW id=12497070 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
membrane lipoprotein lipid attachment site; K12061 conjugal transfer pilus assembly protein TraW Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
IncF plasmid conjugative transfer pilus assembly protein TraW
scnpilot_p_inoc_scaffold_649_25
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18476..18889)
DNA (414bp) protein (138aa)
id=12497071 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497071 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_649_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18912..19457)
DNA (546bp) protein (182aa)
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI id=12497072 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein; K12062 conjugal transfer pilin signal peptidase TrbI Tax=GWE1_Thiobacillus_62_9_curated
Conjugative signal peptidase TrhF
scnpilot_p_inoc_scaffold_649_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19454..19897)
DNA (444bp) protein (148aa)
hypothetical protein
hypothetical protein id=12497073 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_649_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19894..22467)
DNA (2574bp) protein (858aa)
protein TraC; K12063 conjugal transfer ATP-binding protein TraC id=12497074 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
protein TraC; K12063 conjugal transfer ATP-binding protein TraC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
IncF plasmid conjugative transfer pilus assembly protein TraC
scnpilot_p_inoc_scaffold_649_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22464..23021)
DNA (558bp) protein (186aa)
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV id=12497075 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
membrane lipoprotein lipid attachment site
scnpilot_p_inoc_scaffold_649_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23018..23800)
DNA (783bp) protein (261aa)
disulfide bond isomerase, DsbC/G; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12497076 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Displaying items 1-30 of 57 in total

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