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scnpilot_p_inoc_scaffold_1380

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1380_1
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..380
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47694.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_1380_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

515..814
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1380_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

837..1718
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51
putative replication initiator and transcription repressor protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RepA replication protein
scnpilot_p_inoc_scaffold_1380_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1924..2562
DNA (639bp) protein (213aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATPase
scnpilot_p_inoc_scaffold_1380_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2559..2804
DNA (246bp) protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
parB partition protein
scnpilot_p_inoc_scaffold_1380_6
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2801..3334
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
transposase
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_1380_7
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3331..3855
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
peptidase
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_1380_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4010..5959
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.
type VI secretion protein
scnpilot_p_inoc_scaffold_1380_9
unknown

Not on your lists

comp(6101..6250)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1380_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6682..6945
DNA (264bp) protein (88aa)
Putative integral membrane protein n=1 Tax=Moorea producens 3L RepID=F4XNG2_9CYAN
Putative signal peptide protein {ECO:0000313|EMBL:CDI03471.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus
hypothetical protein
scnpilot_p_inoc_scaffold_1380_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..7799
DNA (852bp) protein (284aa)
UPF0276 protein WQE_40134 n=1 Tax=Burkholderia terrae BS001 RepID=I5CH91_9BURK rbh
UPF0276 protein BN874_1740007 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidat
h16_A1821; hypothetical protein
scnpilot_p_inoc_scaffold_1380_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7783..8601
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CH92_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDH44556.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
h16_A1820; hypothetical protein
scnpilot_p_inoc_scaffold_1380_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8629..9060
DNA (432bp) protein (144aa)
MerR family transcriptional regulator id=1311326 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA Tax=GWE1_Thiobacillus_62_9_curated
merR regulatory family protein
scnpilot_p_inoc_scaffold_1380_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9053..9310
DNA (258bp) protein (86aa)
Thioredoxin/glutaredoxin id=1311325 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin/glutaredoxin Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin/glutaredoxin
scnpilot_p_inoc_scaffold_1380_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9364..9978
DNA (615bp) protein (205aa)
Cytochrome c biogenesis protein, transmembrane region id=1311324 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c biogenesis protein, transmembrane region Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1380_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9980..10675
DNA (696bp) protein (232aa)
Putative cytochrome c biogenesis protein id=1311323 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative Cytochrome c biogenesis protein Tax=GWE1_Thiobacillus_62_9_curated
cytochrome C biogenesis transmembrane region family protein
scnpilot_p_inoc_scaffold_1380_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10715..11140
DNA (426bp) protein (142aa)
DUF1791 protein id=1311322 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1380_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11207..11788
DNA (582bp) protein (194aa)
Thiol:disulfide interchange protein DsbG n=2 Tax=Acidithiobacillus caldus RepID=F9ZS47_ACICS
hypothetical protein; K03805 thiol:disulfide interchange protein DsbG Tax=RBG_16_Betaproteobacteria_66_20_curated
Thiol:disulfide interchange protein DsbG
scnpilot_p_inoc_scaffold_1380_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..12370)
DNA (498bp) protein (166aa)
arsC1; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protein tyrosine phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3EA5
hypothetical protein
scnpilot_p_inoc_scaffold_1380_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12388..12819)
DNA (432bp) protein (144aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protein tyrosine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D35
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_1380_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12849..13322)
DNA (474bp) protein (158aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=1320302 bin=GWE1_T_denit_62_9 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=GWE1_Thiobacillus_62_9_curated
Glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_1380_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13334..13672)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373C9BA
arsR; arsenical resistance operon repressor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_1380_23
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13866..14846
DNA (981bp) protein (327aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QUH6_9RHOB
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:EPX83242.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
phosphate binding protein
scnpilot_p_inoc_scaffold_1380_24
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14932..15879
DNA (948bp) protein (316aa)
PstC n=1 Tax=Sinorhizobium sp. M14 RepID=E9KN58_9RHIZ rbh
PstC {ECO:0000313|EMBL:AFR74885.1}; Putative phosphate ABC transporter permease PstC inner membrane subunit {ECO:0000313|EMBL:ADO95179.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteoba
phosphate ABC transporter permease
scnpilot_p_inoc_scaffold_1380_25
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15879..16838
DNA (960bp) protein (320aa)
Phosphate ABC transporter membrane protein 2, PhoT family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SAG1_9RHOB
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:EPX83244.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubell
phosphate ABC transporter permease
scnpilot_p_inoc_scaffold_1380_26
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16859..17725
DNA (867bp) protein (289aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATPase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8H8_9RHIZ
phosphate ABC transporter ATPase
scnpilot_p_inoc_scaffold_1380_27
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17743..18468
DNA (726bp) protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLZ4_9PROT
phosphate uptake regulator PhoU; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Phosphate uptake regulator, PhoU
scnpilot_p_inoc_scaffold_1380_28
unknown

Not on your lists

19089..19205
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1380_29
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..20496
DNA (1287bp) protein (429aa)
Arsenical pump membrane protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0BHP9_ALCFA rbh
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
arsenical pump membrane protein
scnpilot_p_inoc_scaffold_1380_30
unknown

Not on your lists

20669..20794
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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