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scnpilot_p_inoc_scaffold_95_49

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 49262..49621

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=12497372 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 234
  • Evalue 6.30e-59
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 2.10e-57
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 1.10e-56

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCACGCGTGAAACGGGGCGTAACTGCCCGCGCCAGCCACAAGAAAATCCTCGATGCCGCCAAAGGCTATCGCGGTCGTCGCAAGAACGTCTTCCGCATCGCCAACGAAGCGGTGATGAAGGCGGGCCAGTATGCGTACCGCGACCGTCGCCAGCGCAAGCGTCAGTTCCGTGCCCTGTGGATTGCCCGCATCAACGCGGCCGCCCGTACCCACGGCCTGACCTACAGCGTCTTCATGAACGGCCTGTCCCGGGCCGAGATCGGCGTCGACCGCAAGGTGCTGTCCGACATCGCGATCTTCGACAAGGACGGCTTTGCCAAGATCGTCGATCAGGTCAAGGCCAAACTCGCCGCGTAA
PROTEIN sequence
Length: 120
MPRVKRGVTARASHKKILDAAKGYRGRRKNVFRIANEAVMKAGQYAYRDRRQRKRQFRALWIARINAAARTHGLTYSVFMNGLSRAEIGVDRKVLSDIAIFDKDGFAKIVDQVKAKLAA*