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scnpilot_p_inoc_scaffold_209_45

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(44674..45225)

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12497869 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 370
  • Evalue 1.10e-99
  • rbh
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 183.0
  • Bit_score: 291
  • Evalue 7.10e-76
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 183.0
  • Bit_score: 262
  • Evalue 7.10e-68

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGATCAGACGCGTACTTTTTGGTCCCTTCCGTCCCGGCATCGAATCCCTGCGACCGGTGTTGTACCGGATCGCCTATTCGTGGTGCCACGACCCCACCCTGGCCGACGATCTGGCGCAGGACACGCTTTCGAAAGCCTGGACGCAGCGCGCGCAACTGCGCGAAGCGTCGGCCATGAAGGCCTGGGCGGTGGCGATCATGCACCGCTGCTGGATGGACCATCTGCGCACGCGGCGCGACTTCGACAGCCTTGACGACTGGCAGGAGACGATCGAATCCGCTTCGGACTCCCCCGAAACCTGTTGCGATCGCGAGCAGATCGTCGCCTGTGTCCGGGCCGCGGTCGCGCGTCTGCCCCTCGGTCAGCGTCAGGTGCTGACTTTGGTCGATCTCGAAGAGTTCGGTTATGCCGAGGTCGCGAGAATCCTGGATATCCCGGTGGGTACCGTGATGAGCCGGCTGTCGCGCGCGCGCGCCGGACTCAGGGCCATACTCGACCGCGCGATGCGGCAGCAGACGGCCGATCGCCCCGCTTTGAGGAGGGTGAAATGA
PROTEIN sequence
Length: 184
MIRRVLFGPFRPGIESLRPVLYRIAYSWCHDPTLADDLAQDTLSKAWTQRAQLREASAMKAWAVAIMHRCWMDHLRTRRDFDSLDDWQETIESASDSPETCCDREQIVACVRAAVARLPLGQRQVLTLVDLEEFGYAEVARILDIPVGTVMSRLSRARAGLRAILDRAMRQQTADRPALRRVK*