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scnpilot_p_inoc_scaffold_274_113

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 110528..110806

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3-like protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZH8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 92.0
  • Bit_score: 187
  • Evalue 5.20e-45
Type IV secretion protein VirB3 {ECO:0000313|EMBL:KGM47017.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 92.0
  • Bit_score: 191
  • Evalue 6.60e-46
type IV secretory pathway VirB3 family protein similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 5.50e-45

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Taxonomy

Pseudooceanicola atlanticus → Pseudooceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GTGGCCGAACGATCGCCGCTCTTTCTGGGCCTCGTACGCCCGCCCAAGCTCCTCGGCCTGCCGATCATGTATGCCATGGTCTGGCTCTTCGGCTCTGTGCTGCTCTTCGTCTGGGTGCAGCACCTGGTTGTCCTGGGCATCACGGCGGTGCTCTATCCGGTTCTCTGGAAAGCGGCTGACTGGGATCCGCGTTTCATCGACGTGATGATGACGGCGATGCAGGAGACGCCGCCGACGCGGAACCGGTCCATCCACGGGGGCGATAGCTATGCGCCATAG
PROTEIN sequence
Length: 93
VAERSPLFLGLVRPPKLLGLPIMYAMVWLFGSVLLFVWVQHLVVLGITAVLYPVLWKAADWDPRFIDVMMTAMQETPPTRNRSIHGGDSYAP*