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scnpilot_p_inoc_scaffold_274_114

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 110796..113171

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein B4, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U058_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 782.0
  • Bit_score: 1428
  • Evalue 0.0
  • rbh
Type IV secretion system protein B4 {ECO:0000313|EMBL:KGM47016.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceani similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 791.0
  • Bit_score: 1534
  • Evalue 0.0
CagE TrbE VirB component of type IV transporter system similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 791.0
  • Bit_score: 1378
  • Evalue 0.0

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Taxonomy

Pseudooceanicola atlanticus → Pseudooceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2376
ATGCGCCATAGTGAAGCCCTGGACGAGACCGTCGATGAACGCACCCTCATGCCGGCCTGGTATGCCCGCGAGAAACGCCTCGCGCACATGCTGCCCTATGTCAGCCTCGTCGATGATCAGACAGTCCGCACCCGGGTCAACGAACTCTTCCAATGCATCCGCCTGAGCGGGGTGAACAGCTACACCACGGACGACGCCTATCTCGACAAGGTGACGGCGCTCTTCGCCCGGATCATCGCGCAGCTGGGCCCCGAGTTCAGCTACTACGTGCACAAGGTCTCGAAGTCGATCACGCCGGACCTGCTCCCGGTCAAGGGGGACGGCTTCGCGGCGGCGGTGGATGATGCCTGGCGCGCAAAGCTGGCCTCGGCAGGTCTCCGGGACAAGACCCTCACACTCACAATCATCCAGCGCCCACCGCCCAGAAGCTTCCTCGGCTTCGTGAACCGTTCCGCACCGGAGCGATTCAAGGAAGAGACCGCGAAACGGCTCAGACGCCTCAAGGAGGCGGTCGGGGTCTTCAACTCCGGCCTGGCGGAACTCAAGCCCCGCATCCTCACGGCGACCTCTGGCGAGTTGGTCGGGTTCCTCGGTGCGCTCAACACCGGCCGCGAACTGCCGCTCTATCCCGCAAACCGCTACGGGTTTCTGGCCTACAACGTTGCCAATACTCGCGTGACGTTTCTGGAAGATCATTTCGAGCTCTCTGACGGCGTGGTCGGCCATCGCTTCGGTAAGAGCTTCACCATCGGCGAATATGCCGAAGGTACCACCTGCACCATGTTCGACATGCTGAACCTGCCGGTCGACATGATCGTCACCCATTCCTTCACACCGATCAATTCGAACCTGATGGCGGGCCGGATCAAACGCCAGAAGCGCCAGATGCAAGCCTCGCAAGACGCCGCTCTGTCGCTCCTAGAGGCACTCGACATCGCGCATGATGATCTTGAGGCCAAACGCCAGAGCTTCGGTGAGCACCACATGGTGGTGACCGTCTTCTGCGACAGCCTCGACGAGTTGCAAACCCTCGGGGCCGAGATCGTGAACGCCGCGGCCGCCGAAGGCGTGAAGATGATCGGCGAGCGGATGGCCGCGAAATCGCATTACTTCAGCCAGCATCCGGGCAACCAGCCGAAGCGGGTGCGCGCCAGCGCCGTTACCAACCGCAACTTCGCGGATTTCGCAGCACTTCATCGCACCCAGCTCGGCAAGGAGAAACACCAGCTGCCCTGGGGCCAGGAGATCACGCTCTTCCCGACGCCGGAACAGAGCGCATATCGTTTCTCTTATCACGAACAGGGCTCGCCAGAGAAAGAACCGACCAGCGGGCATACCCTGATCCTGGGCCGTCCCGGTTCTGGTAAATCGGTCCTCTCGGCCTTTCTGATGACTCAGGCCCGGCGCGTCGGCGCCCGCATCTTCGTTTTTGACTATCGGCTCGGGATGGAGATGGCCGTCCGCGCCAATGGTGGGCGCTACGCCTCGATCAAGGCGGGACAGACGACCGGTCTCAACCCGCTCTGGACCGAAATCGATGAGCGCGGCACCGCCTGGCTCTCGGATTGGCTCGCCTCGCTCCTCTATCGCTCTGACAAGCCCCTGACCCCGGCCCAGACCAACCGCATCCAGGAGGTGGTCCGCCAGAACGCCACAGCCACCAACCCGGCCTTGCGGAACTGGAAGGACTTCGCCTCGCTCTTTGTCTCGACCGACGACAATGGCGACCTGCACCAACGGCTCCTCGAATGGACGGAGGATGGCCGCTACGGCTGGATCTTCGGCCAGAGCCTCGAGGACACCTTCTCCCTTGATGGCGATGTCGTGGGGTTTGACCTGACCGGTATTCTTGACAGCGAGAGCGAGAAGGAGCGCATGGCGGTACTCTCCTATCTCTTCCGCCGGATCGAGCGAGAGATCGAGGACCGTCGCCCCACCATCATCGTGATCGACGAGGCATGGAAGGCGCTCGACAACCCATACTTTGCCGAACGGCTCTCGAACTGGCTGGTGACCGCCCGAAAACAGAACACCGTCGCGGTGATGATGACGCAATATGCGAGCCAGCTCGAACGCACGCGGACCGGCAAGACCATCGTCGAGGCGGTGCCGACGCAGATCCTGCTCCCCAACATCCGGGCCCATGCCTCGGACTACGCGATGCTGAACCTCTTCGAGAAAGAGCTCGACGTGCTCCTGAACACCGGCAGCGACAGCCGTCTCGCCCTCATCCGCGACGACAGCGGCTCCGTGGTGGTCGACGCCGACTTCTCCGCCCTCGGCCCCCTCCTCACCATCCTCGGCGGCATGGAGAAGGGCGAGGCCCTCACCGGCCCCGACTACCGCGACAGACCTGATTTCTGGAGGCTCTCATGA
PROTEIN sequence
Length: 792
MRHSEALDETVDERTLMPAWYAREKRLAHMLPYVSLVDDQTVRTRVNELFQCIRLSGVNSYTTDDAYLDKVTALFARIIAQLGPEFSYYVHKVSKSITPDLLPVKGDGFAAAVDDAWRAKLASAGLRDKTLTLTIIQRPPPRSFLGFVNRSAPERFKEETAKRLRRLKEAVGVFNSGLAELKPRILTATSGELVGFLGALNTGRELPLYPANRYGFLAYNVANTRVTFLEDHFELSDGVVGHRFGKSFTIGEYAEGTTCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQDAALSLLEALDIAHDDLEAKRQSFGEHHMVVTVFCDSLDELQTLGAEIVNAAAAEGVKMIGERMAAKSHYFSQHPGNQPKRVRASAVTNRNFADFAALHRTQLGKEKHQLPWGQEITLFPTPEQSAYRFSYHEQGSPEKEPTSGHTLILGRPGSGKSVLSAFLMTQARRVGARIFVFDYRLGMEMAVRANGGRYASIKAGQTTGLNPLWTEIDERGTAWLSDWLASLLYRSDKPLTPAQTNRIQEVVRQNATATNPALRNWKDFASLFVSTDDNGDLHQRLLEWTEDGRYGWIFGQSLEDTFSLDGDVVGFDLTGILDSESEKERMAVLSYLFRRIEREIEDRRPTIIVIDEAWKALDNPYFAERLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIVEAVPTQILLPNIRAHASDYAMLNLFEKELDVLLNTGSDSRLALIRDDSGSVVVDADFSALGPLLTILGGMEKGEALTGPDYRDRPDFWRLS*