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scnpilot_p_inoc_scaffold_314_51

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(49333..50124)

Top 3 Functional Annotations

Value Algorithm Source
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellim similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 260.0
  • Bit_score: 405
  • Evalue 6.30e-110
Efflux ABC transporter, permease protein id=3010183 bin=GWF1_Rhodobacteraceae_65_7 species=Ruegeria pomeroyi genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 252.0
  • Bit_score: 404
  • Evalue 7.70e-110
  • rbh
putative ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 260.0
  • Bit_score: 401
  • Evalue 1.80e-109

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Taxonomy

Rubellimicrobium mesophilum → Rubellimicrobium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGATCTGGTGGCTGGCCTTCCGCGCCATCCTGCACCGCGAGGCGCTGCGCTTTCTGGGTCAGCGCGGACGGCTGGTTGCCGCACTGGTGCGACCGCTGGTCTGGCTTCTGGTCTTTGCCGCCGGGTTCCGCGCGGCACTGGGCCTGTCGATCATCCCGCCCTACCAGACCTATATCACTTACGAAATCTACATCACCCCCGGCCTCTGCGGCATGATCTGCCTGTTCAACGGCATGCAAAGCTCGCTGAGCCTCGTCTATGACCGCGAGATGGGGTCGATGCGCCTGCTGCTGACCGCACCCTTGCCGCGCTGGTGGCTGCTGCTTGCCAAGGTCACGGCGGGGGCGATGATTTCGCTGCTGCAATGCGCGGCCTTCCTTGCCATCGCGGCGGCTTTCGGCATCCGCATGCCATGGCCGGGCTATATCGCCGCCATTCCTGCCATTCTGCTGGCCGGGCTGATGCTGGGGGCGCTGGGTCTGATGCTGTCCTCCTTCATCCGCCAGCTTGAAAACTTCGCGGGGGTGATGAACTTCGTCATCTTCCCGATGTTCTTCCTGTCCTCGGCGCTTTACCCGCTGTGGAAGATGAAAGAGGCAAGCCCCCTTCTGGCCCGGCTTTGCGCCGTGAACCCCTTTACCCATGCGGTCGAGCTGATCCGCTTCGCGCTGTACCTGCAACCCAATGCGGCGGCTGCGGGATGGGTCTTGCTGGCGCTCATAGTGTTCGGCACGGCAGCGCTTTGGGGCTATGATCCGGCGCGGGGAATGCAGGCGCGCAAAGGGTCTTGA
PROTEIN sequence
Length: 264
MIWWLAFRAILHREALRFLGQRGRLVAALVRPLVWLLVFAAGFRAALGLSIIPPYQTYITYEIYITPGLCGMICLFNGMQSSLSLVYDREMGSMRLLLTAPLPRWWLLLAKVTAGAMISLLQCAAFLAIAAAFGIRMPWPGYIAAIPAILLAGLMLGALGLMLSSFIRQLENFAGVMNFVIFPMFFLSSALYPLWKMKEASPLLARLCAVNPFTHAVELIRFALYLQPNAAAAGWVLLALIVFGTAALWGYDPARGMQARKGS*