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scnpilot_p_inoc_scaffold_314_52

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(50121..50840)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHP4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 236.0
  • Bit_score: 330
  • Evalue 1.70e-87
  • rbh
Putative ABC transporter {ECO:0000313|EMBL:EYR81263.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 236.0
  • Bit_score: 330
  • Evalue 2.40e-87
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 234.0
  • Bit_score: 321
  • Evalue 2.20e-85
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGACCCCCGGCCTCGGCATCCATGCGGTCAGCTACAGCTATGGCGCGAAAGTGGCGCTGAGCGAGGTGACGCTTGAGGTGCCGAAGGGTCGGTTCTGTGCGCTCCTCGGGCCGAACGGGGCAGGGAAATCGACGCTGTTTTCCCTGCTCACACGGCTGTTTACCACGCGGACAGGCCGCATCGCCGTGGCAGGTCAGGATCTGGCCCGCGCGCCCCGCGCCGCGCTGGCGCGCATGGGGGTGGTCTTCCAGCAACCAACGCTGGATCTTGACCTGACGGTGCGGCGCAACCTGCTGTATTTCGCCGCCCTGCACGGCATCGGCGGGCGCGAGGCCGAGGTCCGCACCGCCGAGGCGCTGGAGCGTCTGGGCATGGCCGAACGCGCGGCCGAACCCGTCCATGCCCTGAACGGTGGCCACCGCCGCCGGATGGAACTGGCGCGCGCCCTGATCCACCGGCCCGAGGTCTTGCTGCTGGACGAACCGACGGTCGGCCTTGATGCCGCCGCACGGGCAGCGATCACCGCACATGTCCACGATCTTGCCGATCAGGGGCTGGCCGTGCTCTGGGCCACGCATCTGACGGACGAGGTGCGCGACAGCGACCAGCTTGCCATTCTGCATCGCGGTCGCCTGCTCGCCTCCGGCACCACCGGCGACCTGCGCGGGGACGAGCCGCTGCGCGAGATGTTCCTGCGTCTGACGGGGGTCGAGGCATGA
PROTEIN sequence
Length: 240
MTPGLGIHAVSYSYGAKVALSEVTLEVPKGRFCALLGPNGAGKSTLFSLLTRLFTTRTGRIAVAGQDLARAPRAALARMGVVFQQPTLDLDLTVRRNLLYFAALHGIGGREAEVRTAEALERLGMAERAAEPVHALNGGHRRRMELARALIHRPEVLLLDEPTVGLDAAARAAITAHVHDLADQGLAVLWATHLTDEVRDSDQLAILHRGRLLASGTTGDLRGDEPLREMFLRLTGVEA*