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scnpilot_p_inoc_scaffold_1355_15

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 8675..12814

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 999.99
  • Bit_score: 2594
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 999.99
  • Bit_score: 2594
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta id=3043554 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 999.99
  • Bit_score: 2607
  • Evalue 0.0
  • rbh

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4140
ATGAGCATGGCTCAGAGCTACGTTGGCCAGAAGCGGATCCGCCGCTACTTTGGCAAAATCCGTGAAGTCCTTGAAATGCCGAACCTAATCGAGGTTCAGAAATCCTCTTATGACCTGTTCCTGAAATCGGGCGACGGCCCGAAGGCGCAGGATGGCGAGGGCATTCAGGGCGTCTTCCAGTCGGTTTTCCCGATCAAGGACTTCAACGAGACCGCCGTTCTGGAATTCGTGAAATACGAGCTGGAAAAGCCGAAATATGACGTCGACGAGTGCCAGCAGCGCGACATGACCTATGCCGCGCCGCTGAAGGTGACGCTGCGTCTGATCGTGTTCGATGTCGATGAAAACACCGGCGCCCGGTCGGTGAAGGACATCAAGGAACAGGACGTCTACATGGGCGACATGCCCCTGATGACGGCGAACGGTACGTTCATCGTGAACGGCACCGAGCGCGTGATCGTCAGCCAGATGCACCGTTCGCCCGGTGTGTTCTTCGACCACGACAAGGGCAAGACCCATTCCTCGGGCAAACTGCTGTTCGCCTGCCGCATCATCCCGTATCGCGGCTCGTGGCTGGACTTCGAGTTCGACGCCAAGGACATCGTGTTCGCACGCATTGACCGTCGCCGGAAACTGCCCGTGACGACGCTGCTCTATGCCCTGGGCATGGATCAGGAAAGCATCATGAAGGCGTATTACGATACGGTCACCTTCAAGTATCAGAAGAACAAGGGCTGGGTGACCCGGTTCTTCCCCGAGCGCGTGCGCGGCACCCGGCCGAGCTATGATCTCGTGGATGCGGCCACCGGCGAGGTGATCCTGAAGGCGGGCGAGAAAGCCACGCCGCGTATGGTCAAGAAATGGATCGACGAGGCGCAGATCACCGAACTGCTGATCCCGTTCGACCATATCATCGGCCGCTATGTCGCGCGTGACATCATCAACGAAGACACCGGCGAGATCTGGGTCGAGGCCGGTGATGAACTCACCATGGACTACGACCGCGACGGCGAGGTGAAGGGTGGCACGCTGAAGGTGCTGCTGGATCAGGGCATCACCGAGATCCCGGTGCTGGACATCGACAATATTAACGTCGGTCCCTACATCCGCAACACCATGGCCGCGGACAAGAACTGGAACCGCGACACCGCGCTGATGGACATCTATCGCGTGATGCGTCCGGGCGAGCCGCCGACCGTGGAAGCCGCCTCGACCCTGTTCGACACGCTGTTCTTCGACAGCGAGCGCTATGACCTGTCGGCCGTGGGCCGCGTCAAGATGAACATGCGTCTGGATCTGGCGAAGCCGGATACCCAGCGCACGCTGGACCGCGACGATATCGTCCAGTGCATCAAGGCGCTGGTCGAACTGCGGGATGGCAAGGGCGAGATCGACGACATCGACCACCTCGGCAACCGCCGTGTGCGTTCGGTGGGCGAGCTGATGGAAAATCAGTATCGCGTCGGCCTGCTGCGCATGGACCGTGCGATCAAGGAGCGGATGTCGTCGGTGGAAATCGACACGATCATGCCGCAAGACCTGATCAACGCCAAACCGGCCGCTGCCGCGGTGCGCGAGTTCTTTGGCTCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAGTGACGCACAAACGCCGTCTGTCGGCGCTCGGGCCGGGCGGTCTGACCCGCGAACGCGCGGGCTTCGAGGTGCGCGACGTTCACCCGACCCACTATGGCCGGATGTGCCCCATCGAGACGCCGGAAGGCCAGAACATCGGTCTGATCAACTCGCTGGCCACGTTTGCCCGCGTGAACAAGTATGGCTTCATCGAAACCCCCTACCGCAAGGTGGTGGACGGCAAGGTGACCGACGATGTGGTCTACATGTCGGCGACCGAAGAGATGCGCCATACCGTCGCGCAGGCCAACGCCGCGCAGGATGAGCAGGGCCGCTTCCAGGACGATCTGATTTCGTCGCGGAAAGCGGGCGAATTCATGCTCAATCCGCCGGATGCCATCGACCTGATCGACGTGTCGCCGAAACAGCTCGTGTCGGTCGCGGCTTCGCTCATTCCCTTCCTGGAAAATGACGACGCCAACCGTGCGCTGATGGGTTCGAACATGCAGCGGCAGGCCGTGCCGCTGCTGCAATCGGATGCCCCCTTCGTCGGCACTGGGATCGAGGCCGTCGTGGCCCGCGACTCGGGCGCGGCCATCATGGCGCGGCGCGGCGGCGTGATCGACCAGGTCGACGCGACCCGTATCGTTGTGCGTGCGACCGAGTTCCTGGAACCCGGCGAGCCGGGCGTGGACATCTATCGTCTGCGCAAGTTCAAGCGGTCGAACCAGTCGTCCTGCATCAACCAGCGCCCGCTGGTGAAGGTGGGCGACAAGGTAGCGCGTGGCGAAGTGGTGGCCGATGGCCCCTGCACCGACATGGGCGAACTGGCGCTTGGCCGGAACGTGATCGTGGCCTTCATGCCGTGGAACGGCTACAACTATGAAGACTCGATCCTGATCTCGGAGCGCATCCTGCGCGACGACGTGTTCACCTCGATCCATATCGAGGAATACGAAGTCGCCGCCCGCGATACCAAGCTCGGGCCGGAAGAAATCACCCGCGACATCCCGAACGTCGGTGAAGAGGCGCTGCGCAACCTCGACGAGGCTGGCATCGTTTACATCGGCGCAGAGGTGCAGCCGGGTGATATTCTGGTCGGCAAGATCACCCCGAAGGGCGAAAGCCCGATGACGCCGGAAGAGAAGCTTCTGCGCGCCATCTTCGGGGAAAAGGCCAGCGACGTGCGTGACACCTCGCTGCGTCTGCCGCCGGGCGCCTATGGCACTATCGTGGAAGTCCGTGTGTTCAACCGTCATGGCGTGGACAAGGACGAGCGTGCGCTTCAGATCGAGCGTGAAGAAGTGGAACGCCTGTCGCGCGACCGCGACGACGAGCTGACCATTCTGGAGCGCAACATCTATGCGCGTCTGAAGTCGCTGATCATGGGCAAGGTCGCCGTCAAGGGTCCGAAAGGCATCAAGGCAGGTTCGACCATTGATGACGAACTGCTGGGGTCGCTGTCGCGTGGCCAGTGGTGGCAGCTTGCTGTCGGCGAGGAAGATCTGGCCAAGGAAGTCGAGGCCCTGCACGACCAGTTCGAGGCTCAGCGCCGCGCGCTGGACCTGCGCTTCGAGGACAAGGTCGAGAAGGTCCGTCGCGGCGACGATCTGCCTCCGGGCGTGATGAAGATGGTCAAGGTGTTCGTCGCGGTGAAGCGCAAGCTGCAACCGGGCGACAAGATGGCCGGTCGTCACGGCAACAAGGGCGTTATCTCGAAAGTGGTGCCGATGGAGGACATGCCGTTCCTCGCGGATGGCACCCCGGTCGATCTGGTGCTGAACCCGCTCGGCGTGCCGTCGCGGATGAACGTCGGTCAGATCCTTGAAACGCACATGGGCTGGGCGGCGCGCGGTCTGGGCCTGAAGATCGATGAGGCGCTGAAGGACTATCGCCGCTCCGGCGATATGACTCCGGTGCGTGAGGCGATGCGTCTGGCCTACGGCGACGAGACCTATGACGCCGCCTTCTCGGACCGCGACGAGGACGAATTCCTTGAACTGGCCGGGAACGTCACGCGCGGCGTGCCGATTGCCACGCCGGTCTTCGATGGTGCGAAAGAGGCGGACGTCAACGACGCGCTGCGCCGGGCCGGTTTCGACCAGTCGGGTCAGTCGGAGGTGTTCGATGGTCGCACGGGCGAGAAATTCGCCCGGCGTGTCACCGTGGGCGTGAAATACATGCTCAAGCTGCACCACCTTGTCGACGACAAGCTGCACGCACGTTCGACCGGACCGTACTCCCTCGTCACCCAGCAACCGCTGGGCGGCAAGGCGCAGTTCGGTGGTCAGCGTCTGGGGGAGATGGAGGTCTGGGCTCTGGAAGCCTATGGCGCCGCCTACACCCTGCAAGAGATGCTGACGGTGAAGTCGGACGACGTGGCCGGCCGGACCAAGGTCTACGAGTCGATCGTGAAGGGCGAGGACAATTTCGAAGCGGGCGTTCCCGAGAGCTTCAACGTGCTCGTCAAGGAAGTCCGCGGCCTCGGCCTGAATATGGAACTCCTGGATGCGGAGGAGGAGTGA
PROTEIN sequence
Length: 1380
MSMAQSYVGQKRIRRYFGKIREVLEMPNLIEVQKSSYDLFLKSGDGPKAQDGEGIQGVFQSVFPIKDFNETAVLEFVKYELEKPKYDVDECQQRDMTYAAPLKVTLRLIVFDVDENTGARSVKDIKEQDVYMGDMPLMTANGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFACRIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGMDQESIMKAYYDTVTFKYQKNKGWVTRFFPERVRGTRPSYDLVDAATGEVILKAGEKATPRMVKKWIDEAQITELLIPFDHIIGRYVARDIINEDTGEIWVEAGDELTMDYDRDGEVKGGTLKVLLDQGITEIPVLDIDNINVGPYIRNTMAADKNWNRDTALMDIYRVMRPGEPPTVEAASTLFDTLFFDSERYDLSAVGRVKMNMRLDLAKPDTQRTLDRDDIVQCIKALVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMDRAIKERMSSVEIDTIMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFARVNKYGFIETPYRKVVDGKVTDDVVYMSATEEMRHTVAQANAAQDEQGRFQDDLISSRKAGEFMLNPPDAIDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQSDAPFVGTGIEAVVARDSGAAIMARRGGVIDQVDATRIVVRATEFLEPGEPGVDIYRLRKFKRSNQSSCINQRPLVKVGDKVARGEVVADGPCTDMGELALGRNVIVAFMPWNGYNYEDSILISERILRDDVFTSIHIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHGVDKDERALQIEREEVERLSRDRDDELTILERNIYARLKSLIMGKVAVKGPKGIKAGSTIDDELLGSLSRGQWWQLAVGEEDLAKEVEALHDQFEAQRRALDLRFEDKVEKVRRGDDLPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKVVPMEDMPFLADGTPVDLVLNPLGVPSRMNVGQILETHMGWAARGLGLKIDEALKDYRRSGDMTPVREAMRLAYGDETYDAAFSDRDEDEFLELAGNVTRGVPIATPVFDGAKEADVNDALRRAGFDQSGQSEVFDGRTGEKFARRVTVGVKYMLKLHHLVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEE*