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scnpilot_p_inoc_scaffold_1355_16

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12861..17102

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 999.99
  • Bit_score: 2544
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 999.99
  • Bit_score: 2544
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=3043552 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 999.99
  • Bit_score: 2626
  • Evalue 0.0
  • rbh

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4242
ATGAACCAGGAACTGACCAACAACCCGTTCAACCCGGTTGCCCCCGTCAAGACCTTTGACGAGATCAAGATCTCGCTGGCTTCGCCCGAGCGGATCCTGTCGTGGTCCTATGGCGAGATCAAGAAGCCGGAAACCATCAACTACCGCACGTTCAAGCCCGAACGTGACGGCCTGTTCTGCGCGCGGATCTTTGGCCCGATCAAGGATTACGAATGCCTTTGCGGCAAATACAAGCGCATGAAATATCGCGGCGTCGTCTGCGAAAAATGCGGCGTGGAAGTGACGCTCCAGAAGGTGCGGCGCGAGCGGATGGGCCATATCGAACTGGCCGCCCCCGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCGAGCCGGATCGGCCTCATGCTCGACATGACGCTGCGCGATCTGGAACGCATCCTCTATTTTGAAAACTACGTCGTCATCGAGCCGGGTTTGACTGACCTGACTTATGGCCAGCTGATGACGGAAGAGGAATTCCTCGACGCGCAGGACAACTACGGCGCCGACGCCTTCACCGCCAATATCGGCGCCGAGGCGATCCGCGAGATGCTGTCGAATATCGACCTCGATTCGACGGCCGAACAGTTGCGCGAAGAGCTGAAGGAAGCCACGGGCGAACTGAAGCCGAAGAAGATCATCAAGCGGCTGAAGATCGTGGAATCTTTCCTCGAGTCGGGCAACCGTCCCGAGTGGATGATCCTGACCGTGCTGCCGGTGATTCCGCCGGAACTGCGCCCGCTGGTCCCGCTGGACGGCGGCCGCTTCGCTACGTCCGATCTGAACGACCTCTATCGTCGCGTCATCAACCGGAACAACCGCCTGAAGCGGCTGATCGAACTGCGTGCGCCCGATATCATCGTGCGCAACGAAAAGCGGATGCTGCAAGAGGCGGTTGACGCGCTGTTCGACAACGGCCGTCGCGGCCGCGTGATCACGGGCACCAACAAGCGCCCGCTGAAATCGCTGTCCGACATGCTGAAAGGCAAACAGGGCCGGTTCCGTCAGAACCTGCTGGGTAAGCGCGTCGACTTCTCGGGCCGTTCGGTCATCGTGACCGGGCCGGAACTCAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAACTGTTCAAGCCCTTCATCTATTCGCGTCTGGAGGCCAAGGGCCTGTCCTCGACCGTGAAACAGGCGAAGAAGCTGGTCGAGAAAGAGCGCCCGGAGGTCTGGGATATCCTCGACGAGGTGATCCGCGAGCATCCGGTTCTTCTGAACCGTGCGCCCACGCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGCAACTGATCGAGGGCAAGGCGATCCAGCTTCACCCGCTGGTCTGCTCGGCTTTCAACGCCGACTTCGACGGCGACCAGATGGCTGTGCACGTCCCGCTGAGCCTTGAGGCGCAGCTGGAAGCCCGCGTTCTGATGATGTCGACGAACAACGTTCTGTCGCCCGCCAACGGCGCGCCGATCATCGTTCCGTCGCAGGACATGGTTCTGGGCCTTTATTACGTCACCATGGAACGCAAGGGCATGGTTGGCGAAGGCAAGGTCTTCCGCGACATCGAGGAAGTCGAACATGCACTGGCAGCCGGTGCGGTGCATCTGCATGCCAAGATCCAGGCGCGTCTGCGTCAGGTCGATGACGAAGGCAACATCGTCTGGAAGCGCTATGAGACGACCCCCGGTCGTCTGCGTCTGGGCAACCTGCTGCCGCTGAACGCCAAAGCGCCGTTCGAGCTGGTGAACCGCCCGCTGCGGAAGAAAGACGTGCAGACCGTCATCGACACCGTCTACCGCTACTGTGGCCAGAAGGAATCGGTGATCTTCTGCGATCAGATCATGGGTCTGGGCTTCCGCGAGGCCTTCCGTGCCGGCATCTCGTTCGGCAAGGACGACATGGTGATCCCCGACAACAAATGGGAGATCGTCAACGAGGTGAAGGATCAGGTTGCCGGGTTCGAGCAACAGTATCTGGACGGTCTGATCACCCAGGGCGAGAAGTACAACAAGGTCGTGGACGCCTGGTCGAAGTGTAACGACAAGGTCACCGACGCCATGATGAAAACCATCTCGGCGCCGAAGTTCGACGACACTGGTGCCGAGAAAGAGCCGAACTCGGTCTATATGATGGCCCACTCCGGTGCACGGGGTTCGGTCACGCAGATGAAGCAGCTGGGCGCGATGCGCGGCCTGATGGCCAAGCCGAACGGCGAGATCATCGAGACACCGATCATCTCGAACTTCAAGGAAGGTCTTACCGTTCTTGAATACTTCAACTCGACCCACGGCGCCCGGAAGGGTCTGTCGGATACCGCGCTGAAGACGGCGAACTCGGGCTACCTGACCCGCCGTCTGGTGGACGTGGCGCAGGACTGCATCGTGCGCGTGCACGATTGCGGCACCGAACGCGCGATCAATGCCGAGGCTGCGGTGAATGACGGTGAAGTCGTGGCTTCGCTGGCCGAGCGTGTGCTGGGCCGCGTGGCTGCCGATGACATCGTGGTGCCGGGCACCGACGAGGTGATCGTCAAGAAGGGTGAGCTGATCGACGAACGTCGTGCCGATGCCATCTCGACCCATGGCGTGCAGCATTGCCGCATCCGCAGCCCGCTGACCTGCGAGGCTGAGGAAGGCGTCTGCGCCATGTGCTATGGTCGTGACCTTGCACGCGGTACGCTGGTGAACATCGGCGAGGCTGTCGGCATCATCGCCGCGCAGTCGATCGGCGAACCGGGCACCCAGCTGACCATGCGGACCTTCCACATCGGTGGCGTGGCCCAGGGTGGCCAGCAGTCATTCCTGGAAGCTTCGCAGGAAGGCCGGATCGAGTTCCGCAATGCCAACCTTCTGTCGAACGCCAATGGCGAGCAGATCGTCATGGGCCGCAACATGTCGCTTGCGATCATCGACGAGAATGGCGGCGAGCGGGCGGTTCACAAGCTGACCTATGGCTCCAAGCTGCACGTCAAGGAAGAGGCGCAGGTCAAGCGCGGCACCAAGCTGTTCGAATGGGACCCCTATACCCTGCCGATCATCGCCGAGAAGGCCGGTGTTGCGAAGTTCGTGGATCTCGTCTCGGGCATCTCGGTCCGCGAGGACACCGACGATGCGACGGGCATGACCCAGAAGATCGTGTCGGACTGGCGGTCGGCGCCGAAAGGCAGCGACCTGAAGCCCGAGGTCATCGTGATGAACCCCGAAACGGGCGAGCCGATGCGCAACGATCAGGGGCATCCGATCAGCTATCCGATGTCGGTCGACGCCATTCTGTCGGTCGAGGACGGGCAGGAACTGCGGGCCGGTGACGTGGTGGCGCGTATCCCGCGCGAAGGTGCCAAGACCAAGGACATCACCGGGGGTCTTCCCCGCGTGGCGGAACTGTTCGAGGCCCGTCGTCCGAAGGATCACGCGATCATCGCCGAAACCGATGGCTATGTGCGCTTTGGCAAGGACTACAAGTCCAAGCGCCGCATCACCATCGAGCCGGTGGACGAGACCCTGCCGACGCAGGAATACATGATCCCGAAAGGGAAGCATATTCCGGTTCAGGAAGGCGATTTCGTCCAGAAGGGCGATTACATCATGGACGGGAACCCCGCGCCGCATGACATCCTGCGCATCATGGGTGTCGAGGCGCTGGCGAACTACATGATCGACGAGGTGCAGGACGTCTATCGACTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTCCAGAAATACGAGGTTCTGGACTCGGGCGAGACGACGCTGCTGAAGGGTGAGCATATCGACAAGATCGAACTGGACGAGGCGAACGAGAAGGCCCGGAACCACGGTCTGCGCGAAGCGCAGGCGGAGCCGATCCTGCTGGGTATCACCAAGGCCAGCCTGCAAACCCGGTCGTTCATCTCGGCCGCGTCGTTCCAGGAAACCACCCGCGTTCTGACCGAGGCTTCGGTTCAGGGTAAGCGCGACAAGCTGGTCGGCCTGAAGGAGAACGTCATCGTGGGTCGTCTGATCCCGGCCGGCACCGGCGGTGCCACCAGCCGCGTGAAGAAGATCGCGCATGATCGTGATCACGAGGTGATCGAGGCCCGCCGTGCCGAGGCTGAAGGTGCCGCCGCTCTGGCCGCTCCGTCCTTCGATGTGATGGACACCGAAGGCGACAGCGGTCTGGTCGATACGGTCGAAAGCCGCGAGTGA
PROTEIN sequence
Length: 1414
MNQELTNNPFNPVAPVKTFDEIKISLASPERILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMTEEEFLDAQDNYGADAFTANIGAEAIREMLSNIDLDSTAEQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWMILTVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYVTMERKGMVGEGKVFRDIEEVEHALAAGAVHLHAKIQARLRQVDDEGNIVWKRYETTPGRLRLGNLLPLNAKAPFELVNRPLRKKDVQTVIDTVYRYCGQKESVIFCDQIMGLGFREAFRAGISFGKDDMVIPDNKWEIVNEVKDQVAGFEQQYLDGLITQGEKYNKVVDAWSKCNDKVTDAMMKTISAPKFDDTGAEKEPNSVYMMAHSGARGSVTQMKQLGAMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGLSDTALKTANSGYLTRRLVDVAQDCIVRVHDCGTERAINAEAAVNDGEVVASLAERVLGRVAADDIVVPGTDEVIVKKGELIDERRADAISTHGVQHCRIRSPLTCEAEEGVCAMCYGRDLARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFLEASQEGRIEFRNANLLSNANGEQIVMGRNMSLAIIDENGGERAVHKLTYGSKLHVKEEAQVKRGTKLFEWDPYTLPIIAEKAGVAKFVDLVSGISVREDTDDATGMTQKIVSDWRSAPKGSDLKPEVIVMNPETGEPMRNDQGHPISYPMSVDAILSVEDGQELRAGDVVARIPREGAKTKDITGGLPRVAELFEARRPKDHAIIAETDGYVRFGKDYKSKRRITIEPVDETLPTQEYMIPKGKHIPVQEGDFVQKGDYIMDGNPAPHDILRIMGVEALANYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKYEVLDSGETTLLKGEHIDKIELDEANEKARNHGLREAQAEPILLGITKASLQTRSFISAASFQETTRVLTEASVQGKRDKLVGLKENVIVGRLIPAGTGGATSRVKKIAHDRDHEVIEARRAEAEGAAALAAPSFDVMDTEGDSGLVDTVESRE*