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scnpilot_p_inoc_scaffold_44

Search features with annotation key words

Displaying items 271-300 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_44_271
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308839..309846)
DNA (1008bp) protein (336aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK7_9GAMM rbh
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:EIM00699.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
scnpilot_p_inoc_scaffold_44_272
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309883..310404)
DNA (522bp) protein (174aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyan
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI7_9GAMM rbh
scnpilot_p_inoc_scaffold_44_273
unknown

Not on your lists

310678..311283
DNA (606bp) protein (202aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_274
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311756..312439
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0331
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIF47870.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_44_275
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(312743..316432)
DNA (3690bp) protein (1230aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=767434 species="Bacteria; Proteobacteria; Gam
Ribonuclease E n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0U5_FRAAD rbh
ribonuclease, Rne/Rng family
scnpilot_p_inoc_scaffold_44_276
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316899..317876
DNA (978bp) protein (326aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373768B rbh
23S rRNA pseudouridylate synthase
scnpilot_p_inoc_scaffold_44_277
unknown

Not on your lists

318004..318231
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_278
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318500..320338
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B54D2 rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
mutL; DNA mismatch repair protein
scnpilot_p_inoc_scaffold_44_279
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320449..321354
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96651.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_44_280
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321368..321880
DNA (513bp) protein (171aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohal
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J813_9GAMM
phosphodiesterase
scnpilot_p_inoc_scaffold_44_281
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322065..322829
DNA (765bp) protein (255aa)
Membrane protein {ECO:0000313|EMBL:KGQ20731.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS
Putative uncharacterized protein id=3022196 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_44_282
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322869..324443
DNA (1575bp) protein (525aa)
TGF-beta receptor type I/II extracellular region n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSJ5_PSEUU rbh
Major facilitator transporter {ECO:0000313|EMBL:KGM51758.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter c
TGF-beta receptor type I/II extracellular region rbh
scnpilot_p_inoc_scaffold_44_283
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324736..324996)
DNA (261bp) protein (87aa)
UPI0003D651E5 related cluster n=1 Tax=unknown RepID=UPI0003D651E5
hypothetical protein Tax=GWD2_Desulfuromonadales_61_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_44_284
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

325124..325399
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4BE60
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
GIY-YIG nuclease superfamily protein
scnpilot_p_inoc_scaffold_44_285
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

325751..326116
DNA (366bp) protein (122aa)
PadR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W639_9GAMM
PadR family transcriptional regulator {ECO:0000313|EMBL:EYR67061.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_44_286
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326113..327006
DNA (894bp) protein (298aa)
Putative membrane protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z1S1_XANCT
Putative membrane protein {ECO:0000313|EMBL:EKU24920.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas tra
membrane protein
scnpilot_p_inoc_scaffold_44_287
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327252..327677
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZLW8_PSEAC
Dehydrogenase {ECO:0000313|EMBL:AKC86510.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwo
YCII-related protein
scnpilot_p_inoc_scaffold_44_288
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327769..328296
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=E2SV58_9RALS
Polyketide cyclase {ECO:0000313|EMBL:KHK49427.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
polyketide cyclase/dehydrase family protein
scnpilot_p_inoc_scaffold_44_289
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

328347..329609
DNA (1263bp) protein (421aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sor
scnpilot_p_inoc_scaffold_44_290
unknown

Not on your lists

comp(329722..330057)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_291
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330343..330831
DNA (489bp) protein (163aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U5S2_SINMW
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABR59002.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
scnpilot_p_inoc_scaffold_44_292
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330969..331574
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZI39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71569.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
signal peptide protein
scnpilot_p_inoc_scaffold_44_293
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331571..332065
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NI33_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ74859.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
scnpilot_p_inoc_scaffold_44_294
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332158..333534)
DNA (1377bp) protein (459aa)
DNA repair protein RadA n=1 Tax=Dyella ginsengisoli RepID=UPI00034CCFC1 rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeoj
DNA repair protein RadA
scnpilot_p_inoc_scaffold_44_295
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333548..334621)
DNA (1074bp) protein (358aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1543381 species="Bacteria; Proteo
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038112BF rbh
alanine racemase
scnpilot_p_inoc_scaffold_44_296
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334794..336182)
DNA (1389bp) protein (463aa)
DNA helicase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003709E44 rbh
Replicative DNA helicase {ECO:0000313|EMBL:EIL92283.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
DNA helicase
scnpilot_p_inoc_scaffold_44_297
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(336376..336822)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003624071
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas co
50S ribosomal protein L9
scnpilot_p_inoc_scaffold_44_298
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(337065..337289)
DNA (225bp) protein (75aa)
30S ribosomal protein S18 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0X4_FRAAD
30S ribosomal protein S18
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_44_299
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(337305..337712)
DNA (408bp) protein (136aa)
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
30S ribosomal protein S6 id=2439212 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
30S ribosomal protein S6
scnpilot_p_inoc_scaffold_44_300
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338013..340307
DNA (2295bp) protein (765aa)
TonB-denpendent receptor n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6FE0F rbh
TonB-dependent receptor Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
TonB-dependent receptor
Displaying items 271-300 of 427 in total

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