ggKbase home page

scnpilot_p_inoc_scaffold_44_276

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 316899..317876

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 316.0
  • Bit_score: 403
  • Evalue 3.00e-109
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373768B similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 325.0
  • Bit_score: 436
  • Evalue 2.90e-119
  • rbh
23S rRNA pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 316.0
  • Bit_score: 403
  • Evalue 6.00e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGACGCGAACTTCGGACAATTCCTCCGGCGCGGGTACGGGCGTGCGACTGGTTCGCGTCGCCGACGACCGCGACGGCCAGCGCATCGACAATTTCCTGGCCGGCCAGCTGAAAGGCGTGCCCAAGAGCCTGATCTATCGGATCTTGCGTACCGGCCAGGTGCGTCTGAACGGCAAGCGCGCCAAGCCCGACAGCCGCGTCGCCGGCGGCGACGAGGTGCGTATCCCGCCGGTGCGCGTGGCCGAGCCCGGTGCGGTCGCGCCGCCGCCGCGCGGCATGACCGAGCGTATTGCCGAGTCCGTCATCTACGAGGACAAGGACTTCCTGGTCCTGTCCAAGCCTGCCGGTATCGCCGCCCACGGCGGTTCCGGCGTCAGCCACGGCGCGATCGAGCTGCTGCGCGCGCTGCGCCCCCGCGACACCATCGAACTCGTGCATCGTCTGGACCGCGACACCAGCGGCGTGCTCGTGCTGGCCCGGCGTCGTGCCGCGCTGACCGGCCTGCAGGAACTGATCCGCGAGAACCGCACGACCAAGCAGTACCTCTGCCTGCTGCAGGGGCAGCTGCCGCGGGCGTCGCTCAGCGTCAACGCGCCGCTGCGCAAGTCGATCCTGCAGGGCGGCGAGCGCATGGTCCGCGTCGACAGCGACGGCAAGCCGTCGCTGACCCATTTCAAGACCATCGAGAAATACGCCGCGGCCAGCCTCGTCGAAGCGACGCTGGAAACCGGCCGCACGCACCAGATCCGCGTGCATAGCCAGCATGTCGGCCATCCGATCGCCGGCGACGACAAGTACGGCGACGCCGAATTCAACAAGTCGCTGCGCCCCTTCGGTCTGCGCCGGCTGTTCCTGCATGCCAAGCATTTCGGCTTCGAGCTCGGCGGCAGGACCTATGCGTTCTCGGCGCCGCTGGCCGAAGACCTGGCAGCGGTGCTCGAGCAGCTGCCGACGGCGCCGCGCCGCGCCGGCGGCTAG
PROTEIN sequence
Length: 326
VTRTSDNSSGAGTGVRLVRVADDRDGQRIDNFLAGQLKGVPKSLIYRILRTGQVRLNGKRAKPDSRVAGGDEVRIPPVRVAEPGAVAPPPRGMTERIAESVIYEDKDFLVLSKPAGIAAHGGSGVSHGAIELLRALRPRDTIELVHRLDRDTSGVLVLARRRAALTGLQELIRENRTTKQYLCLLQGQLPRASLSVNAPLRKSILQGGERMVRVDSDGKPSLTHFKTIEKYAAASLVEATLETGRTHQIRVHSQHVGHPIAGDDKYGDAEFNKSLRPFGLRRLFLHAKHFGFELGGRTYAFSAPLAEDLAAVLEQLPTAPRRAGG*