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scnpilot_p_inoc_scaffold_44

Search features with annotation key words

Displaying items 151-180 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_44_151
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175656..176372
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A9CB7
Uncharacterized protein {ECO:0000313|EMBL:KGI77293.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
regulatory inactivation of DnaA Hda protein
scnpilot_p_inoc_scaffold_44_152
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176474..176782)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031BE77A
competence protein ComEA
Competence protein ComEA {ECO:0000313|EMBL:AIF47387.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_44_153
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177030..178508
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E243F
Peptidase M20 {ECO:0000313|EMBL:KGM56913.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens
succinyl-diaminopimelate desuccinylase
scnpilot_p_inoc_scaffold_44_154
unknown

Not on your lists

comp(178493..178825)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_155
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

178966..179649
DNA (684bp) protein (228aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK74_ANASK
PA-phosphatase {ECO:0000313|EMBL:KIF42975.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
PA-phosphatase-like phosphodiesterase
scnpilot_p_inoc_scaffold_44_156
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179846..180493)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASA6_RUBXD
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABG05722.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
scnpilot_p_inoc_scaffold_44_157
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(180493..181935)
DNA (1443bp) protein (481aa)
Putative signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASA5_RUBXD
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ABG05723.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrob
scnpilot_p_inoc_scaffold_44_158
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182250..183065)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B58DC1
Uncharacterized protein {ECO:0000313|EMBL:KFN44692.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
scnpilot_p_inoc_scaffold_44_159
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183334..183813
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000371E3D3
Nuclear protein SET {ECO:0000313|EMBL:GAN45898.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
SET domain-containing protein
scnpilot_p_inoc_scaffold_44_160
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184093..185367
DNA (1275bp) protein (425aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI77646.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
scnpilot_p_inoc_scaffold_44_161
unknown

Not on your lists

comp(185250..185957)
DNA (708bp) protein (236aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_162
unknown

Not on your lists

186160..186447
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_163
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186457..186912)
DNA (456bp) protein (152aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Beggiatoa alba B18LD RepID=I3CCQ7_9GAMM
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EIJ41400.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiat
osmC; putative redox protein OsmC
scnpilot_p_inoc_scaffold_44_164
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187164..187811
DNA (648bp) protein (216aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
Pseudouridine synthase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L427_FRAAD
pseudouridine synthase family protein
scnpilot_p_inoc_scaffold_44_165
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188077..189315)
DNA (1239bp) protein (413aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003777F4B rbh
scnpilot_p_inoc_scaffold_44_166

Not on your lists

189392..190669
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Thalassiosira oceanica RepID=K0THL8_THAOC
Marine sediment metagenome DNA, contig: S01H1_S21496 {ECO:0000313|EMBL:GAG14437.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
peptidylarginine deiminase
scnpilot_p_inoc_scaffold_44_167
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190781..191269)
DNA (489bp) protein (163aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16484.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_44_168
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191334..191837)
DNA (504bp) protein (168aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16484.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_44_169
unknown

Not on your lists

comp(192030..192770)
DNA (741bp) protein (247aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_170
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193014..193559)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BCAF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16484.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_44_171
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193684..196041)
DNA (2358bp) protein (786aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003664F54 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR69873.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
protein kinase
scnpilot_p_inoc_scaffold_44_172
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196043..196609)
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ECF subfamily RNA polymerase sigma-24 factor Tax=GWF1_Xanthomonadales_69_6_curated
ECF subfamily RNA polymerase sigma-24 factor
scnpilot_p_inoc_scaffold_44_173
unknown

Not on your lists

comp(196754..197335)
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_44_174
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197332..197844)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003480E90
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU81035.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Ma
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_44_175
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197837..199018)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034D8816
Uncharacterized protein {ECO:0000313|EMBL:KGF80714.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;
sodium ABC transporter permease
scnpilot_p_inoc_scaffold_44_176
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199015..199749)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000346DF1B rbh
ATP-binding transport protein NatA {ECO:0000313|EMBL:KFC71924.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia s
ABC-type Na+ transport system, ATPase component
scnpilot_p_inoc_scaffold_44_177
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199796..201211)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CECB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF80716.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;
hypothetical protein
scnpilot_p_inoc_scaffold_44_178
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201307..202890)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E3B7E rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN41790.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
scnpilot_p_inoc_scaffold_44_179
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202938..203972)
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103) Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003688012 rbh
scnpilot_p_inoc_scaffold_44_180
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204046..204930)
DNA (885bp) protein (295aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A88 rbh
protein involved in catabolism of external DNA
Displaying items 151-180 of 427 in total

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