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scnpilot_p_inoc_scaffold_44_174

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(197332..197844)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003480E90 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 162.0
  • Bit_score: 165
  • Evalue 6.70e-38
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU81035.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Ma similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 164.0
  • Bit_score: 158
  • Evalue 8.70e-36
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 164.0
  • Bit_score: 131
  • Evalue 1.80e-28

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGTCTGACGCCGGCGCGCCGCCACGGCCGAGCTTCGCCGCCGTCGTCGCCGAACACGGCGCGGCGATCGCGCGCGTCGCCGCGGCGTTCGAAGCCAACGCCGCGCGCCGCGACGAACTCGGCCAGGAAATCCTGCTCGCCATCTGGCAGAGCCTGCCGCGCTTCCGCGGCGAGTCGGCGCTGAAGACCTTCGTGCTGCGCATCGCGCACAACCGCGCCGTCGATCACGCGCTGCAGGCCAGCCGCGACCCGGCGCGCGACGAGGTGCAGCCGGACCTGCCCGATCCGCGCAGCGGGCCCGAGCACACCGCCGGCCTGCGCCAGCGCGGCGAACGCCTCGCACGCATCGTGCGCGGCCTGCCACTGGCCCAGCGCCAGCTCGTCACGCTCGCGCTGGAAGGTCTGTCGCACGAGGAAATCGGCGGCATGCTCGGCATTTCGGTCGGCAACGTCGCCGTGCGCCTGAACCGCGCGCGCAAGCAGATAACCCGGGAAATGGGAGAGTCCGCATGA
PROTEIN sequence
Length: 171
MSDAGAPPRPSFAAVVAEHGAAIARVAAAFEANAARRDELGQEILLAIWQSLPRFRGESALKTFVLRIAHNRAVDHALQASRDPARDEVQPDLPDPRSGPEHTAGLRQRGERLARIVRGLPLAQRQLVTLALEGLSHEEIGGMLGISVGNVAVRLNRARKQITREMGESA*