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scnpilot_p_inoc_scaffold_48

Search features with annotation key words

Displaying items 511-540 of 546 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_48_511
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

652193..652459
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7V2_PSEAI
Genome assembly B1459, plasmid I {ECO:0000313|EMBL:CEO96489.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
hypothetical protein
scnpilot_p_inoc_scaffold_48_512
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

653677..655212
DNA (1536bp) protein (512aa)
aldehyde dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C048B rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHX12695.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
scnpilot_p_inoc_scaffold_48_513
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(655628..656977)
DNA (1350bp) protein (450aa)
Membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=mine drainage metagenome RepID=T1CD28_9ZZZZ
Membrane protein {ECO:0000313|EMBL:KGI76817.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane protein
scnpilot_p_inoc_scaffold_48_514
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

657348..658379
DNA (1032bp) protein (344aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dih
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C93CF rbh
dihydroorotate dehydrogenase
scnpilot_p_inoc_scaffold_48_515
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

658376..659434
DNA (1059bp) protein (353aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFB8_9GAMM
scnpilot_p_inoc_scaffold_48_516
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

659552..661345
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9E4_CALAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR66187.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
conserved hypothetical protein
scnpilot_p_inoc_scaffold_48_517
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

661355..662719
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9E5_CALAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01883.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
scnpilot_p_inoc_scaffold_48_518
unknown

Not on your lists

662819..663085
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_519
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

663136..663975
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E4660 rbh
Magnesium transporter {ECO:0000313|EMBL:GAN45929.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
magnesium transporter
scnpilot_p_inoc_scaffold_48_520
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

663965..665236
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364533F
Uncharacterized protein {ECO:0000313|EMBL:EIL99692.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_48_521
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

665513..666295
DNA (783bp) protein (261aa)
ABC-type amino acid transport/signal transduction system, domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVN3_9GAMM
ABC-type amino acid transport/signal transduction system, domain protein {ECO:0000313|EMBL:EDY86249.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacte
amino acid ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_48_522
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(666604..668649)
DNA (2046bp) protein (682aa)
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SDG6_HAHCH rbh
signal transduction protein
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain {ECO:0000313|EMBL:ABC31308.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceano
scnpilot_p_inoc_scaffold_48_523
unknown

Not on your lists

668904..670151
DNA (1248bp) protein (416aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_524
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(670310..671221)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI000367FDB3 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EZH84315.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_48_525
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671339..671734
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DIW5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM16757.1}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
scnpilot_p_inoc_scaffold_48_526
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671801..672895
DNA (1095bp) protein (365aa)
nemA2; flavoprotein NADH-dependent oxidoreductase (EC:1.-.-.-)
Flavoprotein NADH-dependent oxidoreductase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NVU7_CHRVO rbh
N-ethylmaleimide reductase {ECO:0000313|EMBL:KJH66509.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium
scnpilot_p_inoc_scaffold_48_527
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

672924..673940
DNA (1017bp) protein (339aa)
NADPH:quinone reductase n=4 Tax=Pseudomonas aeruginosa RepID=V5SU64_PSEAI rbh
NADPH:quinone reductase
NADPH:quinone reductase {ECO:0000313|EMBL:AHB54652.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
scnpilot_p_inoc_scaffold_48_528
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

674153..675169
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377640D
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Olei
magnesium transporter
scnpilot_p_inoc_scaffold_48_529
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

675659..676252
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YEU1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC16687.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
scnpilot_p_inoc_scaffold_48_530
unknown

Not on your lists

676374..677054
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_531
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(677076..677954)
DNA (879bp) protein (293aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1475481
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CC980
scnpilot_p_inoc_scaffold_48_532
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(678067..679272)
DNA (1206bp) protein (402aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:GAN45235.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizug
RNA methylase id=2738201 bin=GWF1_Xanthomonadales_69_6 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
SAM-dependent methyltransferase
scnpilot_p_inoc_scaffold_48_533
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(679560..679931)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CBE3A
Stenotrophomonas maltophilia strain ZBG7B contig_35, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86222.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
DeoR faimly transcriptional regulator
scnpilot_p_inoc_scaffold_48_534
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

680215..680637
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPA4_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26077.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_48_535
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

680826..682901
DNA (2076bp) protein (692aa)
Carbon starvation protein A n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091X0_STIAD rbh
Carbon starvation protein A {ECO:0000313|EMBL:KGQ18660.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dok
cstA; carbon starvation protein A
scnpilot_p_inoc_scaffold_48_536
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

682898..683131
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6D797
Uncharacterized protein {ECO:0000313|EMBL:KFN43405.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
scnpilot_p_inoc_scaffold_48_537
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

683233..686121
DNA (2889bp) protein (963aa)
RNA polymerase-associated protein RapA {ECO:0000256|SAAS:SAAS00017181}; EC=3.6.4.- {ECO:0000256|SAAS:SAAS00017178};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacte
helicase SNF2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA934 rbh
helicase SNF2
scnpilot_p_inoc_scaffold_48_538
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686326..688941
DNA (2616bp) protein (872aa)
transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000374648B
Transcriptional regulator {ECO:0000313|EMBL:KGQ17969.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdo
transcriptional regulator domain-containing protein
scnpilot_p_inoc_scaffold_48_539
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

689453..691384
DNA (1932bp) protein (644aa)
Outer membrane adhesin like proteiin n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5U7_LEPCP
Uncharacterized protein {ECO:0000313|EMBL:KGM32432.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
outer membrane adhesin-like protein
scnpilot_p_inoc_scaffold_48_540
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691624..692226)
DNA (603bp) protein (201aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB4_9GAMM
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHX13935.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying items 511-540 of 546 in total

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